NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS10015.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10015.1 Public Homo sapiens 15 NPAP1 24 110 108 CCDS HistoryNCBI Gene:23742Re-query CCDS DB by CCDS ID:10015.1Re-query CCDS DB by GeneID:23742See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10015.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000329468.5 ENSP00000333735.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000329468.5Link to Ensembl Protein Viewer:ENSP00000333735.3Re-query CCDS DB by Nucleotide ID:ENST00000329468Re-query CCDS DB by Protein ID:ENSP00000333735
Original member Current member NCBI NM_018958.3 NP_061831.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018958.3Link to Protein Sequence:NP_061831.2Re-query CCDS DB by Nucleotide ID:NM_018958Re-query CCDS DB by Protein ID:NP_061831Link to BLAST:NP_061831.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061831.2 1156 Q9NZP6 1156 100% 0 0

Chromosomal Locations for CCDS 10015.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 24675868 24679338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3471 nt):
ATGGGCAATTTACTTAGTAAATTTAGACCCGGGTGCCGCCGCCGGCCCCTGCCAGGGCCAGGGCGTGGCG
CC
CCCGCTCCCCTGTCCCGGGACGCCTCCCCGCCCGGTCGGGCTCACTCTGTACCCACCCCGCGCCCTTT
C
CGCGGCCTGTTCCGCCGGAACGCCCGTCGCAGGCCTTCAGCAGCCAGCATCTTCGTCGCCCCTAAGAGG
CCG
TGTCCTCTCCCTCGGGCTGCGGCCGCCCCTCTGGGGGTCCTGCCGGCTGTGGGTTGGGGGCTGGCCA
TC
AGGAAGACACCCATGCTGCCTGCTCGGAACCCCCCGAGGTTTGGACACCCCAGTTCCGTAAGGATCCC
T
CCTCCCAGCCGCATGTTCACTCTCCTGCTGCCTTCACCACGTGAGCCGGCGGTCAAGGCCAGGAAGCCC
ATC
CCAGCCACTCTCCTGGAGGAGACCGAGGTGTGGGCCCAAGAAGGGCCCAGAAGAGTGAAGAAGGATG
AG
GATCCGGTGCAGATCGAAGGGGAGGATGACGAGAAAAGGACCCCCCTTAGCAGCGGAGAAGCATCGTC
C
ACATCCAGGTCCCAGGGCACCCAGGGAGACGTGGCCTCCTTCAGATGCAGCCCTGGGCCTCTGGAGGGA
AAT
GTCTACCACAAGTTCTCAGAAAACAGCATGAGTGAGAAGGCCCAGGCGTCTCCAGCGAGCTCCTGCT
TG
GAAGGCCCTGCCATGCCCAGCACACACAGCCAGGCCGGATGTGCCCGGCATCTTGGAAAGCCTGATCC
G
GATGCAACAGCGCCCCCTGAGCCAGCCGTTGGCTGCTCCCTGCTGCAGCAGAAGTTGGCTGCGGAAGTG
CTG
AATGAAGAGCCACCGCCCAGCTCCCTAGGCTTGCCGATTCCGCTGATGTCCGGAAAGAGGATGCCTG
AT
GAGAAGCCTTTCTGTATTCCTCCAAGGAGCGCTGCTCCTCCCAGAGCTGCCCGCAACAGGCCCTGCAA
A
AGGAAAATGTCGATTCCATTGCTGCTGCCGCTGCCCCCTTCACTGCCATTGCTGTGGGATCGAGGTGAG
CTT
CCCCCACCTGCTAAGCTCCCCTGCCTGTCTGTTGAGGGAGACCTACACACCTTGGAGAAGAGCCCTG
AG
TATAAAAGGAATAGCAGAATCTTGGAGGATAAAACAGAGACCATGACAAACAGCAGCATCACCCAGCC
T
GCCCCTTCTTTCTCCCAACCTGTGCAGACCACAGACTCCCTGCCCCTGACCACTTACACTTCCCAGGTC
TCA
GCTCCTTTGCCCATCCCTGACTTGGCTGACCTGGCTACTGGACCCCTCATCCTGCCTATCCCTCCAC
TT
TCCACCACACCAAAAATGGATGAGAAAATAGCATTCACAATCCCTAACTCTCCTCTGGCTCTTCCTGC
T
GACCTTGTTCCCATTTTGGGTGATCAGTCTAATGAGAAAGGAGGCTCTTATAATTCAGTCGTAGGAGCA
GCG
CCTCTCACTTCTGACCCCCCAACACCTCCTAGCTCCACACCCTCCTTCAAGCCTCCCGTCACAAGGG
AG
TCCCCAATATCTATGTGTGTGGATTCCCCTCCTCCTCTTTCCTTCCTGACTCTTCTTCCAGTCCCTTC
C
ACCGGGACCTCAGTTATCACCAGCAAGCCTATGAATTCCACGTCAGTCATTTCCACTGTCACAACAAAC
GCA
TCTGCCCACCTAACCTCACAGACTGCGGTAGACCCTGAAGTAGTTAATATGGATACTACTGCCCCAT
CT
CAGGTTGTTATTTTCACATCTTCCCTAAGCTCCAGAGTGAGCTCTCTCCCAAATTCCCAAATACATTG
C
AGTGCAGAGCAGAGGCACCCGGGAAAGACATCAGTCTACACATCCCCACTTCCATTTATATTCCACAAT
ACC
ACCCCAAGTTTTAACCAACTCTTTGGAAAAGAAGCCACCCCTCAGCCCAAATTTGAGGCTCCTGATG
GG
CAGCCGCAGAAAGCTTCTCTCCCCAGTGCCTGTGTTTTCCTGAGCCTTCCCATCATTCCTCCTCCAGA
C
ACCTCCACTTTAGTGAACAGTGCCTCTACAGCATCATCATCCAAACCTCCCATTGAAACCAATGCTATG
CAT
ACCACTCCTCCTTCCAAGGCTGTCATCTTGCAGTCTGCCTCTGTCTCCAAGAAGTACCTCCCATTTT
AC
CTGGGGCTTCCTGGTTCTGGGAACACACAACCCAGCGGCAACACTGCCTCAGTCCAAGGCTCCACCAG
T
TTGCCTGCACAGTCAGTCAGGGCACCAGCTACAGCTTCCAACCATCCTTTAAATCCAGGAGCCACCCCT
CAA
CCCAAATTTGGGGCCCCTGATGGGCCGCAGCAGAAAACCTCTCTCCCCAGTGCCCATGATTTCCTGA
GC
CTTCCTATCATGGTTCCTCCAGACACCTCCACTTTAGTGAGCAGTGCCTCTGCAGCATCGTTATCCAA
G
CCTGCCATTGACACCAGTGACATGAATACCACCCCTCCTTCCAAAACTGTCATCTTGCAGTCTACCTTT
GTC
TCCAGGAAGGAGGAGTACATCCGATTTTATATGGGGCTTCCTGGTTCTGGGAACACACTACACAGTG
AC
AGCATTGCCTCAGCCCAAGTCTCCACCAGTTTTCCTGCACAGGCAGATAGGAGACCAACCACAACTTC
C
AGCCATCCTTTAAATACAGGATCCATCTCTCATTCCACACTTGGGGCCACTGATGGGCAGCAGAAGTCT
GAC
AGTTCTTTTATTCTGGGGAATCCAGCAACCCCAGCACCAGTTATAGGCTTAACATCTCCTTCAGTCC
AG
CCACTGAGTGGCAGCATAATTCCACCAGGTTTTGCAGAGTTAACATCACCATATACTGCATTGGGCAC
A
CCTGTTAATGCTGAGCCAGTCGAGGGTCACAATGCAAGTGCTTTCCCCAATGGCACAGCAAAGACTTCT
GGA
TTTAGAATTGCCACTGGGATGCCTGGCACTGGAGACAGTACCTTACTGGTTGGAAATACTATTCCAG
GC
CCACAAGTGATTATGGGACCTGGAACCCCTATGGATGGTGGGAGCATTGGGTTCAGCATGTCTGCCCC
A
GGCCCCAGTTCCACATCAGGAGAACTCAACATTGGACAAGGACAGAGTGGGACACCCAGCACCACTTCT
GTT
TTCCCATTTGGTCAGGCAGCCTGGGACCCAACTGGCCACAGCATGGCTGCTGCACCACAAGGGGCTA
GC
AACATTCCTGTATTTGGATATACTTCTGCTGCCGCCTACATTCCTGGTTTAGACCCACCTACCCAGAA
T
TCATGCAGTGGTATGGGAGGGGATGGCACCAGATCCATAGTTGGAGGCCCTTGTGTTCCTGCTTTTCAA
CAG
TGCATCCTGCAGCACACATGGACAGAGAGAAAATTCTACACTTCAAGCACCCACTACTATGGACAAG
AA
ACATATGTTAGGAGACATGTCTGTTTCCAACTTCCGTAA


Translation (1156 aa):
MGNLLSKFRPGCRRRPLPGPGRGAPAPLSRDASPPGRAHSVPTPRPFRGLFRRNARRRPSAASIFVAPKR
P
CPLPRAAAAPLGVLPAVGWGLAIRKTPMLPARNPPRFGHPSSVRIPPPSRMFTLLLPSPREPAVKARKP
I
PATLLEETEVWAQEGPRRVKKDEDPVQIEGEDDEKRTPLSSGEASSTSRSQGTQGDVASFRCSPGPLEG
N
VYHKFSENSMSEKAQASPASSCLEGPAMPSTHSQAGCARHLGKPDPDATAPPEPAVGCSLLQQKLAAEV
L
NEEPPPSSLGLPIPLMSGKRMPDEKPFCIPPRSAAPPRAARNRPCKRKMSIPLLLPLPPSLPLLWDRGE
L
PPPAKLPCLSVEGDLHTLEKSPEYKRNSRILEDKTETMTNSSITQPAPSFSQPVQTTDSLPLTTYTSQV
S
APLPIPDLADLATGPLILPIPPLSTTPKMDEKIAFTIPNSPLALPADLVPILGDQSNEKGGSYNSVVGA
A
PLTSDPPTPPSSTPSFKPPVTRESPISMCVDSPPPLSFLTLLPVPSTGTSVITSKPMNSTSVISTVTTN
A
SAHLTSQTAVDPEVVNMDTTAPSQVVIFTSSLSSRVSSLPNSQIHCSAEQRHPGKTSVYTSPLPFIFHN
T
TPSFNQLFGKEATPQPKFEAPDGQPQKASLPSACVFLSLPIIPPPDTSTLVNSASTASSSKPPIETNAM
H
TTPPSKAVILQSASVSKKYLPFYLGLPGSGNTQPSGNTASVQGSTSLPAQSVRAPATASNHPLNPGATP
Q
PKFGAPDGPQQKTSLPSAHDFLSLPIMVPPDTSTLVSSASAASLSKPAIDTSDMNTTPPSKTVILQSTF
V
SRKEEYIRFYMGLPGSGNTLHSDSIASAQVSTSFPAQADRRPTTTSSHPLNTGSISHSTLGATDGQQKS
D
SSFILGNPATPAPVIGLTSPSVQPLSGSIIPPGFAELTSPYTALGTPVNAEPVEGHNASAFPNGTAKTS
G
FRIATGMPGTGDSTLLVGNTIPGPQVIMGPGTPMDGGSIGFSMSAPGPSSTSGELNIGQGQSGTPSTTS
V
FPFGQAAWDPTGHSMAAAPQGASNIPVFGYTSAAAYIPGLDPPTQNSCSGMGGDGTRSIVGGPCVPAFQ
Q
CILQHTWTERKFYTSSTHYYGQETYVRRHVCFQLP




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser