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Report for CCDS10204.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10204.1 Public Homo sapiens 15 PARP16 24 110 108 CCDS HistoryNCBI Gene:54956Re-query CCDS DB by CCDS ID:10204.1Re-query CCDS DB by GeneID:54956See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10204.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000261888.10 ENSP00000261888.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000261888.10Link to Ensembl Protein Viewer:ENSP00000261888.6Re-query CCDS DB by Nucleotide ID:ENST00000261888Re-query CCDS DB by Protein ID:ENSP00000261888
Original member Current member NCBI NM_017851.6 NP_060321.3 Accepted alive Link to Nucleotide Sequence:NM_017851.6Link to Protein Sequence:NP_060321.3Re-query CCDS DB by Nucleotide ID:NM_017851Re-query CCDS DB by Protein ID:NP_060321Link to BLAST:NP_060321.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060321.3 323 Q8N5Y8-3 323 100% 0 0

Chromosomal Locations for CCDS 10204.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 65259407 65259545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65260885 65261026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65263149 65263320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65266562 65266768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65270935 65271072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65286253 65286426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (972 nt):
ATGCAGCCCTCAGGCTGGGCGGCCGCCAGGGAGGCGGCGGGCCGCGACATGCTGGCCGCCGACCTCCGGT
GCAGCCTCTTCGCCTCGGCCCTGCAGAGCTACAAGCGCGACTCGGTGCTGCGGCCCTTCCCCGCGTCCTA
CGCCCGCGGCGACTGTAAGGACTTTGAAGCCCTGCTTGCAGATGCCAGCAAGTTACCTAACCTGAAAGAA
CTTCTCCAGTCCTCCGGAGACAACCACAAACGGGCCTGGGACCTGGTGAGCTGGATTTTATCCTCAAAGG
TCCTGACAATCCACAGTGCAGGGAAGGCAGAGTTTGAAAAGATCCAAAAGCTGACTGGGGCTCCTCACAC
GCCTGTTCCTGCACCGGACTTCCTGTTTGAAATTGAGTACTTTGACCCAGCCAACGCCAAATTTTATGAG
ACCAAAGGAGAACGAGACCTAATCTATGCATTTCATGGTAGCCGCCTAGAAAACTTCCATTCCATTATCC
ACAATGGCCTGCACTGCCATCTGAACAAGACATCCTTGTTCGGAGAGGGGACCTACCTCACCAGTGACTT
GAGCCTGGCCCTCATATACAGCCCCCATGGCCATGGGTGGCAGCACAGCCTCCTCGGCCCCATCCTTAGC
TGTGTGGCCGTGTGTGAGGTCATTGACCATCCGGACGTCAAGTGCCAAACCAAGAAGAAGGATTCCAAGG
AGATAGATCGCAGACGAGCGAGAATCAAACATAGTGAAGGGGGAGACATCCCTCCCAAGTACTTCGTGGT
CACCAATAACCAGCTGCTGCGAGTGAAGTACCTCCTGGTGTATTCACAGAAGCCACCCAAGAGCAGGGCT
TCGAGCCAGCTCTCCTGGTTTTCCAGCCATTGGTTTACCGTCATGATATCCCTGTATCTGCTGCTGCTGC
TCATAGTGAGTGTCATCAACTCCTCTGCTTTCCAACACTTTTGGAATCGTGCGAAAAGATAA

Translation (323 aa):
MQPSGWAAAREAAGRDMLAADLRCSLFASALQSYKRDSVLRPFPASYARGDCKDFEALLADASKLPNLKE
LLQSSGDNHKRAWDLVSWILSSKVLTIHSAGKAEFEKIQKLTGAPHTPVPAPDFLFEIEYFDPANAKFYE
TKGERDLIYAFHGSRLENFHSIIHNGLHCHLNKTSLFGEGTYLTSDLSLALIYSPHGHGWQHSLLGPILS
CVAVCEVIDHPDVKCQTKKKDSKEIDRRRARIKHSEGGDIPPKYFVVTNNQLLRVKYLLVYSQKPPKSRA
SSQLSWFSSHWFTVMISLYLLLLLIVSVINSSAFQHFWNRAKR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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