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Report for CCDS10600.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10600.2 Public Homo sapiens 16 OTOA 24 110 108 CCDS HistoryNCBI Gene:146183Re-query CCDS DB by CCDS ID:10600.2Re-query CCDS DB by GeneID:146183See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 10600.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000388958.8 ENSP00000373610.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000388958.8Link to Ensembl Protein Viewer:ENSP00000373610.3Re-query CCDS DB by Nucleotide ID:ENST00000388958Re-query CCDS DB by Protein ID:ENSP00000373610
Original member Current member EBI ENST00000646100.2 ENSP00000496564.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000646100.2Link to Ensembl Protein Viewer:ENSP00000496564.2Re-query CCDS DB by Nucleotide ID:ENST00000646100Re-query CCDS DB by Protein ID:ENSP00000496564
Original member Current member NCBI NM_144672.4 NP_653273.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_144672.4Link to Protein Sequence:NP_653273.3Re-query CCDS DB by Nucleotide ID:NM_144672Re-query CCDS DB by Protein ID:NP_653273Link to BLAST:NP_653273.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653273.3 1139 Q7RTW8-5 1139 100% 0 0

Chromosomal Locations for CCDS 10600.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 21678515 21678605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21678915 21678943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21679036 21679066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21679184 21679211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21681738 21681825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21685230 21685361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21687413 21687648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21691584 21691687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21697775 21697875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21700888 21701027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21705169 21705292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21709888 21710103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21714985 21715152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21716907 21717047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21719133 21719191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21719387 21719504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21722905 21722978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21726523 21726658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21728241 21728431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21730837 21730930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21736261 21736390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21740721 21740908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21744881 21745036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21751935 21752077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21752369 21752505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21753027 21753124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21757082 21757277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21760470 21760540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3420 nt):
ATGTCTCAGGAACCTACGACATACTCCCTTTTCCTATTCCTTTTTCTGAGCCATGGAGTGTCGAGTTATA
CAGTGCCAAATTCCAGGCAGGATTTGCATCCATTGTTGCAAAACATGGCGGAAGAAATAATAGATGGAAG
CTATCTGAATGCACTGCTGGATCTCATACAGTTTCAAAGCTCCCACGTGTGGACGGATGACCTGTCCCAC
AGAGTCCTGGCCTATCTGAATTCCCGGAATGTTGCCTTCACCATCCCCAGCCTGCAGGCAGCCGTGGAAA
ACCACCTGGAGCAGCGTCTGCACCAGCCCCAGAAGCTGCTGGAGGACCTGAGGAAGACAGACGCCCAGCA
GTTCCGCACTGCCATGAAATGCCTCTTAGAAGACAAGAAGGACGGCTTGGACCTGAAAGACATCATCATC
GACTTAGGAGAGATTCGAGAACGAGCCTTGCAGAGCCCTGGCGTGAACCGCAGCCTGTTTCTCATCACAC
TGGAGAGGTGTTTCCAGATGCTGAACTCCCTGGAGTGTGTGGAGATCCTGGGCAAGGTGCTGAGGGGGTC
CTCAGGGAGCTTTCTCCAGCCAGACATCACAGAGCGGCTCCCTCGGGACCTGCGCGAGGATGCCTTTAAG
AACCTATCTGCAGTGTTCAAAGATCTCTACGACAAAACCTCGGCTCATTCCCAGAGAGCTCTCTATTCCT
GGATGACTGGAATACTGCAGACATCCTCCAATGCCACTGATGACTCTGCTTCATGGGTCAGTGCGGAACA
CTTATGGGTTTTGGGCAGATACATGGTTCACCTATCGTTTGAAGAAATTACGAAAATTAGTCCTATAGAA
ATTGGGCTGTTTATCAGCTATGACAACGCCACCAAGCAGCTGGACATGGTCTATGACATCACACCTGAGC
TGGCCCAGGCGTTTCTGGAGAGGATCAGCTCCTCCAACTTTAACATGAGGAATACCTCCACCATCCACAG
GCTGGGGCTGCTGGTTTGTTTCTACAATGACCTGGAATTGCTGGATGCCACTGTGGCTCAAGTCCTGCTT
TACCAGATGATCAAGTGCAGCCACCTGAGGGGCTTCCAGGCTGGCGTCCAGAAGCTCAAAGCAGAACTCC
TGGACATTGCCATGGAGAACCAGACCCTCAATGAGACCCTGGGTTCTTTGTCGGATGCAGTTGTAGGTTT
GACCTACAGCCAACTGGAATCCCTCTCCCCCGAGGCTGTGCACGGAGCCATCTCCACCCTCAACCAGGTC
TCAGGTTGGGCCAAGAGCCAGGTCATCATCTTGTCTGCCAAATACTTGGCCCATGAGAAGGTGCTGTCTT
TCTACAATGTCAGCCAGATGGGCGCACTGCTGGCTGGGGTCAGCACCCAGGCCTTCTGCAGCATGAAACG
CAAGGACATCTCGCAGGTCCTGAGAAGTGCCGTCTCCCAGTATGTATCCGACTTGTCACCTGCCCAGCAG
CAAGGTATCCTCAGCAAGATGGTCCAAGCGGAAGACACTGCCCCAGGCATCGTGGAGATACAAGGGGCTT
TCTTTAAGGAAGTGTCTCTCTTTGATTTAAGGAGGCAACCTGGATTCAACTCTACAGTCCTGAAGGATAA
GGAACTTGGAAGGAGCCAGGCTCTGTTCCTGTATGAGCTTCTGTTAAAGACCACCAGAAGGCCTGAGGAG
CTTTTGAGTGCTGGGCAGCTGGTCAAAGGCGTGACCTGCTCACACATTGATGCCATGAGCACTGACTTCT
TTCTGGCCCATTTCCAGGATTTTCAGAACAACTTCGCCCTGCTTTCACCCTATCAGGTTAATTGTTTGGC
GTGGAAATACTGGGAAGTTTCCAGATTGTCTATGCCACCTTTCCTCTTGGCTGCACTCCCGGCCCGCTAC
CTGGCTTCTGTCCCAGCCTCCCAGTGTGTGCCCTTTCTGATCAGCCTGGGGAAGAGCTGGTTGGACTCCT
TGGTTTTAGATTCCCACAAAAAGACTTCAGTCCTCAGGAAAGTGCAGCAGTGCCTGGACGACTCCATTGC
TGATGAGTACACTGTGGACATCATGGGGAACCTGCTGTGTCACTTGCCGGCAGCCATCATCGACAGGGGG
ATCTCCCCCAGGGCTTGGGCGACTGCTCTACACGGCCTCAGAGACTGCCCAGACCTCAACCCTGAGCAAA
AGGCTGCAGTGAGGCTCAAGCTCCTGGGACAGTATGGACTCCCTCAGCACTGGACAGCCGAGACCACGAA
GGACTTGGGACCCTTTCTAGTACTTTTCTCAGGAGATGAATTAAGCTCTATAGCCACAAAGTTTCCTGAG
ATCCTTCTGCAAGCAGCTTCCAAGATGGCCAGGACCCTGCCCACTAAAGAATTCCTCTGGGCTGTCTTTC
AGTCTGTTCGGAACAGCAGTGATAAGATCCCCAGCTATGACCCTATGCCTGGTTGCCATGGAGTCGTGGC
CCCCTCTTCTGATGACATCTTCAAGTTGGCCGAAGCCAACGCCTGCTGGGCCCTGGAGGACCTGCGGTGC
ATGGAGGAAGACACATTCATCAGGACCGTGGAACTGCTGGGAGCTGTCCAGGGTTTCAGCCGGCCTCAGC
TGATGACCCTGAAGGAGAAAGCAATACAGGTTTGGGACATGCCATCTTACTGGAGAGAACACCATATCGT
CTCCCTGGGGCGCATTGCTCTGGCTCTTAATGAGAGTGAGCTGGAGCAGCTGGACCTCAGCTCCATAGAC
ACTGTGGCTTCCCTAAGCTGGCAAACAGAATGGACCCCGGGACAGGCTGAATCCATTTTGCAAGGGTACC
TGGATGATTCAGGATACAGTATCCAGGACCTGAAGAGCTTTCATTTGGTAGGACTTGGTGCAACCCTGTG
TGCTATAAACATCACTGAAATCCCACTTATAAAGATCTCAGAATTCAGGGTGGTAGTGGCCAGAATTGGG
ACCCTGCTCTGCAGCACACATGTCTTAGCCGAGTTTAAGAGGAAGGCTGAAGTTGTGTTTGGGGATCCCA
CTGAGTGGACCAGTTCTGTCTTGCAGGAGCTTGGGACCATTGCAGCTGGATTAACTAAGGCAGAGCTCCG
GATGCTTGACAAGGATTTGATGCCATATTTCCAGCCATCAGCAATAAAATGCCTTCCTGATGAGATATTC
AAAGAGCTGTCCGCGGAGCAGATCGCCTCCCTGGGTCCGGAGAACGCCGCGGCGGTGACCCACGCCCAGC
GCCGGCGGCTCAGTCCACTGCAGCTGCAGAGCCTCCAGCAGGCGCTAGATGGCGCCAAGACTCACTCCTG
GCAGGACGCGCCCGCTAGCGCCGGTCCCACTAGAACCTCATCCTCGCGTTCTCCCGCAGGAGCTCTCCAG
TCGTGGGGTCTTTGGCTTGGTTGTCCCCTGCTGGTTCTAATGGCCAAGCTCCTGTGGTGA

Translation (1139 aa):
MSQEPTTYSLFLFLFLSHGVSSYTVPNSRQDLHPLLQNMAEEIIDGSYLNALLDLIQFQSSHVWTDDLSH
RVLAYLNSRNVAFTIPSLQAAVENHLEQRLHQPQKLLEDLRKTDAQQFRTAMKCLLEDKKDGLDLKDIII
DLGEIRERALQSPGVNRSLFLITLERCFQMLNSLECVEILGKVLRGSSGSFLQPDITERLPRDLREDAFK
NLSAVFKDLYDKTSAHSQRALYSWMTGILQTSSNATDDSASWVSAEHLWVLGRYMVHLSFEEITKISPIE
IGLFISYDNATKQLDMVYDITPELAQAFLERISSSNFNMRNTSTIHRLGLLVCFYNDLELLDATVAQVLL
YQMIKCSHLRGFQAGVQKLKAELLDIAMENQTLNETLGSLSDAVVGLTYSQLESLSPEAVHGAISTLNQV
SGWAKSQVIILSAKYLAHEKVLSFYNVSQMGALLAGVSTQAFCSMKRKDISQVLRSAVSQYVSDLSPAQQ
QGILSKMVQAEDTAPGIVEIQGAFFKEVSLFDLRRQPGFNSTVLKDKELGRSQALFLYELLLKTTRRPEE
LLSAGQLVKGVTCSHIDAMSTDFFLAHFQDFQNNFALLSPYQVNCLAWKYWEVSRLSMPPFLLAALPARY
LASVPASQCVPFLISLGKSWLDSLVLDSHKKTSVLRKVQQCLDDSIADEYTVDIMGNLLCHLPAAIIDRG
ISPRAWATALHGLRDCPDLNPEQKAAVRLKLLGQYGLPQHWTAETTKDLGPFLVLFSGDELSSIATKFPE
ILLQAASKMARTLPTKEFLWAVFQSVRNSSDKIPSYDPMPGCHGVVAPSSDDIFKLAEANACWALEDLRC
MEEDTFIRTVELLGAVQGFSRPQLMTLKEKAIQVWDMPSYWREHHIVSLGRIALALNESELEQLDLSSID
TVASLSWQTEWTPGQAESILQGYLDDSGYSIQDLKSFHLVGLGATLCAINITEIPLIKISEFRVVVARIG
TLLCSTHVLAEFKRKAEVVFGDPTEWTSSVLQELGTIAAGLTKAELRMLDKDLMPYFQPSAIKCLPDEIF
KELSAEQIASLGPENAAAVTHAQRRRLSPLQLQSLQQALDGAKTHSWQDAPASAGPTRTSSSRSPAGALQ
SWGLWLGCPLLVLMAKLLW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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