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Report for CCDS11743.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11743.2 Public Homo sapiens 17 PRPSAP1 24 110 108 CCDS HistoryNCBI Gene:5635Re-query CCDS DB by CCDS ID:11743.2Re-query CCDS DB by GeneID:5635See the combined annotation on chromosome 17 in Sequence Viewer

Public Note for CCDS 11743.1
The coding region has been updated to represent an alternate 5' splice pattern, which results in an extension of the N-terminus to one that is more supported by available transcript and conservation data.

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 11743.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000446526.8 ENSP00000414624.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000446526.8Link to Ensembl Protein Viewer:ENSP00000414624.2Re-query CCDS DB by Nucleotide ID:ENST00000446526Re-query CCDS DB by Protein ID:ENSP00000414624
Original member Current member NCBI NM_002766.3 NP_002757.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002766.3Link to Protein Sequence:NP_002757.2Re-query CCDS DB by Nucleotide ID:NM_002766Re-query CCDS DB by Protein ID:NP_002757Link to BLAST:NP_002757.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002757.2 385 Q14558-2 385 100% 0 0

Chromosomal Locations for CCDS 11743.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 76311542 76311700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76312870 76313016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76313821 76313891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76328717 76328862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76330043 76330098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76330551 76330666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76332263 76332435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76344671 76344737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76348529 76348581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76353534 76353703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1158 nt):
ATGCCCAAGAAGCTGCTGCTGTTGCCCCCGCCCTCCGCGTCCTCGGCTTTCCGCGTCCCGCGCGCCCGCC
CCGTTCCCCCGCCGGCCATGAACGCCGCTCGCACCGGCTACCGAGTCTTCTCGGCCAACTCCACGGCCGC
CTGCACGGAGCTGGCCAAGCGCATCACAGAGCGCCTTGGTGCTGAATTGGGGAAGTCTGTTGTATATCAA
GAGACCAATGGAGAAACAAGAGTTGAAATAAAAGAATCTGTTCGTGGCCAAGATATTTTCATTATACAGA
CAATACCCAGAGATGTGAATACAGCTGTGATGGAGTTGCTCATCATGGCTTACGCACTGAAGACTGCCTG
TGCCAGGAACATTATTGGGGTCATCCCCTACTTCCCCTACAGCAAGCAGAGCAAGATGAGGAAGAGGGGT
TCCATTGTGTGCAAGCTGCTAGCATCCATGCTGGCGAAAGCAGGTTTAACTCACATTATCACTATGGATC
TTCATCAAAAGGAAATACAAGGCTTTTTCAGCTTTCCTGTGGACAACCTTAGAGCCTCACCTTTCCTGCT
TCAGTATATCCAGGAAGAAATTCCAAATTACAGAAATGCAGTCATTGTAGCTAAGTCTCCTGATGCTGCA
AAGAGGGCCCAGTCCTATGCGGAGAGACTGCGTCTGGGTTTGGCCGTCATTCACGGGGAAGCTCAGTGCA
CGGAACTGGACATGGACGATGGTCGTCACTCCCCGCCTATGGTCAAAAATGCTACTGTGCACCCAGGCCT
GGAGTTGCCATTGATGATGGCCAAAGAGAAGCCACCGATAACTGTAGTTGGAGATGTTGGAGGCCGCATC
GCAATCATCGTGGATGACATTATTGACGATGTGGAGAGTTTTGTTGCTGCCGCGGAGATCCTGAAAGAGA
GAGGCGCCTATAAGATCTATGTTATGGCCACCCACGGCATCCTGTCTGCAGAGGCCCCTCGCCTGATTGA
GGAGTCCTCCGTAGACGAGGTGGTGGTGACGAATACTGTCCCTCATGAGGTTCAGAAGCTGCAATGTCCC
AAGATAAAGACTGTGGATATCAGTTTGATTCTTTCTGAAGCCATTCGGAGAATCCACAATGGAGAGTCCA
TGGCCTACCTTTTCCGAAACATCACTGTGGATGACTAG

Translation (385 aa):
MPKKLLLLPPPSASSAFRVPRARPVPPPAMNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQ
ETNGETRVEIKESVRGQDIFIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRG
SIVCKLLASMLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDAA
KRAQSYAERLRLGLAVIHGEAQCTELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPPITVVGDVGGRI
AIIVDDIIDDVESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEESSVDEVVVTNTVPHEVQKLQCP
KIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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