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Report for CCDS13048.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13048.1 Public Homo sapiens 20 FASTKD5 24 110 108 CCDS HistoryNCBI Gene:60493Re-query CCDS DB by CCDS ID:13048.1Re-query CCDS DB by GeneID:60493See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13048.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000380266.4 ENSP00000369618.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000380266.4Link to Ensembl Protein Viewer:ENSP00000369618.3Re-query CCDS DB by Nucleotide ID:ENST00000380266Re-query CCDS DB by Protein ID:ENSP00000369618
Original member Current member EBI ENST00000692371.1 ENSP00000510038.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000692371.1Link to Ensembl Protein Viewer:ENSP00000510038.1Re-query CCDS DB by Nucleotide ID:ENST00000692371Re-query CCDS DB by Protein ID:ENSP00000510038
Original member Current member EBI ENST00000688674.1 ENSP00000510078.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000688674.1Link to Ensembl Protein Viewer:ENSP00000510078.1Re-query CCDS DB by Nucleotide ID:ENST00000688674Re-query CCDS DB by Protein ID:ENSP00000510078
Original member Current member EBI ENST00000687419.1 ENSP00000510780.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000687419.1Link to Ensembl Protein Viewer:ENSP00000510780.1Re-query CCDS DB by Nucleotide ID:ENST00000687419Re-query CCDS DB by Protein ID:ENSP00000510780
Original member Current member NCBI NM_021826.5 NP_068598.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021826.5Link to Protein Sequence:NP_068598.1Re-query CCDS DB by Nucleotide ID:NM_021826Re-query CCDS DB by Protein ID:NP_068598Link to BLAST:NP_068598.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_068598.1 764 Q7L8L6 764 100% 0 0

Chromosomal Locations for CCDS 13048.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 3146776 3149070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2295 nt):
ATGGCAGCTACTCTCAAGTCATTAAAACTTGTAAGATACCGAGCATTTTGCAGTCCTTCTGCCTTTGGTG
CAGTCCGAAGTGTGTCATACTGGAATGTGAGCAGCACACAGCATGGGGGACAGGACCCTCCAGAACACAT
TAGCCTCTGCCATTCTGCCAAAAAAGTTAAGAACATATGTAGCACCTTCTCTTCTCGGAGAATCCTGACA
ACCAGCAGTGCCCACCCAGGTTTGGAATTCAGCAAGACTTCTTCCTCTAAGGCCAGTACATTGCAGCTGG
GCTCACCCAGGGCCACAGGAGTTGATGAAGAGGACGTAGAAGTGTTTGATTCCTTTGAAAACATGCGAGT
TTTCCTACAGCTAAGACCAGAATACCGTGTTCACAGCTATAATGCATCTGAGACTTCTCAGCTCCTGTCT
GTTTCAGAAGGTGAACTAATTTTGCACAAAGTCAGAGTTAATCAAAATAATCTCCAGGCTCAAGTCATTG
TTGATTATTTGTGTAAGCTGAGCTCTTTGCCTGCAGAGCAGCATCCTGTCTTGCTGGGCAGTACCAGCTT
TGCTCTGCTCTGCCAGCTGAGTGTGAAGAAGATACAGCTCTTTGATACCCAAGATCTGATCAATGTTTTG
AAAGCTTTTGTCATTTTAGGAATCCCTCACTCCCATTCAATGCTAGATGTGTATGAGACCAAGTGTTGCC
ATCAGGTATGGGAGATGAATATGGATCAGCTCCTTTTGGTGGCTGATCTCTGGAGGTACTTAGGCCGCAA
AGTACCTAGGTTTTTAAACATTTTTTCTAGTTATCTTAATTTGCACTGGAAGGATCTATCCTTGTCTCAG
CTAGTTCACTTAATTTATGTTATAGGTGAAAATCGTCAGGTATCCCAGGACCTAATGCAAAAATTGGAAT
CATTGATCCTTAAATATATAGATTTGATCAATTTGGAGGAGGTTGGTACCATCTGTTTGGGGTTCTTTAA
ATCAAGTACTAATCTCTCTGAATTTGTCATGCGGAAAATTGGAGACTTGGCTTGTGCTAACATTCAGCAT
CTGAGTAGTCGCTCCTTAGTGAATATTGTTAAAATGTTCCGTTTCACTCACGTGGATCACATCAATTTCA
TGAAGCAGATTGGAGAGATAGCTCCTCAGCGAATTCCTTCCCTGGGAGTTCAAGGTGTCATGCACCTGAC
TCTTTACTGCTCGGCCTTACGCTTCCTGAATGAAGGAGTAATGAATGCAGTGGCTGCGTCTTTGCCTCCT
AGAGTGGCACACTGTCGAAGTAAAGATGTTGCCAAGATTCTGTGGTCATTTGGAACTCTGAATTATAAGC
CACCCAATGCAGAAGAATTTTACTCCAGCCTGATAAGTGAGATTCACAGAAAGATGCCTGAATTCAACCA
GTACCCAGAACACCTGCCCACCTGCCTGCTGGGCCTGGCATTTTTGGAGTACTTTCCAGTAGAGTTAATT
GATTTCGCTCTCAGTCCAGGGTTTGTCAGGTTAGCTCAGGAGAGAACTAAGTTTGACCTCCTTAAGGAAC
TATATACCCTCGATGGTACAGTTGGCATTGAGTGTCCAGATTACAGAGGCAATCGTCTTAGTACTCACCT
TCAGCAAGAGGGGTCTGAATTGCTGTGGTATTTAGCAGAGAAGGATATGAATTCAAAGCCTGAATTCTTA
GAAACTGTCTTTTTACTGGAGACCATGCTGGGGGGGCCCCAGTACGTCAAGCACCATATGATTTTGCCTC
ATACCCGATCTTCTGACTTAGAGGTCCAGCTTGATGTTAACCTGAAGCCATTACCATTTAATAGAGAAGC
CACGCCGGCTGAAAATGTAGCCAAATTAAGGCTTGAGCATGTGGGAGTCAGCCTTACAGATGATTTGATG
AATAAGTTACTAAAAGGGAAAGCAAGAGGACATTTCCAGGGCAAAACTGAGTCAGAGCCTGGGCAGCAGC
CCATGGAGTTGGAGAATAAGGCAGCTGTACCTCTGGGGGGCTTCCTTTGCAATGTAGCAGATAAATCAGG
GGCCATGGAGATGGCTGGCCTGTGCCCCGCAGCCTGCATGCAGACCCCAAGAATGAAGCTGGCTGTTCAG
TTCACAAACAGGAACCAGTATTGCTATGGCTCCAGGGATCTCCTTGGACTGCACAATATGAAGAGGCGGC
AGCTGGCTCGGCTTGGCTACCGTGTGGTAGAGTTATCCTACTGGGAATGGCTCCCACTACTGAAACGAAC
TCGCTTAGAAAAGTTGGCGTTTCTTCATGAGAAAGTATTCACCTCTGCTCTCTGA

Translation (764 aa):
MAATLKSLKLVRYRAFCSPSAFGAVRSVSYWNVSSTQHGGQDPPEHISLCHSAKKVKNICSTFSSRRILT
TSSAHPGLEFSKTSSSKASTLQLGSPRATGVDEEDVEVFDSFENMRVFLQLRPEYRVHSYNASETSQLLS
VSEGELILHKVRVNQNNLQAQVIVDYLCKLSSLPAEQHPVLLGSTSFALLCQLSVKKIQLFDTQDLINVL
KAFVILGIPHSHSMLDVYETKCCHQVWEMNMDQLLLVADLWRYLGRKVPRFLNIFSSYLNLHWKDLSLSQ
LVHLIYVIGENRQVSQDLMQKLESLILKYIDLINLEEVGTICLGFFKSSTNLSEFVMRKIGDLACANIQH
LSSRSLVNIVKMFRFTHVDHINFMKQIGEIAPQRIPSLGVQGVMHLTLYCSALRFLNEGVMNAVAASLPP
RVAHCRSKDVAKILWSFGTLNYKPPNAEEFYSSLISEIHRKMPEFNQYPEHLPTCLLGLAFLEYFPVELI
DFALSPGFVRLAQERTKFDLLKELYTLDGTVGIECPDYRGNRLSTHLQQEGSELLWYLAEKDMNSKPEFL
ETVFLLETMLGGPQYVKHHMILPHTRSSDLEVQLDVNLKPLPFNREATPAENVAKLRLEHVGVSLTDDLM
NKLLKGKARGHFQGKTESEPGQQPMELENKAAVPLGGFLCNVADKSGAMEMAGLCPAACMQTPRMKLAVQ
FTNRNQYCYGSRDLLGLHNMKRRQLARLGYRVVELSYWEWLPLLKRTRLEKLAFLHEKVFTSAL


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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