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Report for CCDS14180.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14180.2 Public Homo sapiens X REPS2 24 110 108 CCDS HistoryNCBI Gene:9185Re-query CCDS DB by CCDS ID:14180.2Re-query CCDS DB by GeneID:9185See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 14180.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357277.8 ENSP00000349824.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000357277.8Link to Ensembl Protein Viewer:ENSP00000349824.3Re-query CCDS DB by Nucleotide ID:ENST00000357277Re-query CCDS DB by Protein ID:ENSP00000349824
Original member Current member NCBI NM_004726.3 NP_004717.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004726.3Link to Protein Sequence:NP_004717.2Re-query CCDS DB by Nucleotide ID:NM_004726Re-query CCDS DB by Protein ID:NP_004717Link to BLAST:NP_004717.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004717.2 660 Q8NFH8-1 660 100% 0 0

Chromosomal Locations for CCDS 14180.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 16946862 16947134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 17006221 17006344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 17022123 17022271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 17025059 17025185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 17029526 17029623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 17047347 17047482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 17052382 17052445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 17054808 17054950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 17062438 17062532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 17068402 17068471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 17069940 17069993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 17074114 17074159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 17077271 17077407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 17103718 17103779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 17133824 17133907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 17135261 17135406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 17138856 17138961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 17147413 17147481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1983 nt):
ATGGAGGCGGCAGCGGCGGCGGCGGCGGCGGCAGCGGCAGCGGCAGCGGCGGGCGGGGGCTGTGGCTCCG
GGCCGCCGCCGCTGCTGCTGAGCGAGGGCGAGCAGCAGTGCTACTCCGAGCTCTTCGCGCGCTGTGCCGG
CGCCGCGGGCGGGGGCCCCGGGTCTGGGCCCCCCGAGGCCGCCAGAGTCGCCCCCGGCACGGCCACTGCG
GCCGCCGGCCCCGTGGCTGACCTGTTTCGGGCATCGCAGCTGCCCGCCGAGACGCTGCACCAGATCACAG
AACTGTGTGGTGCAAAGCGGGTTGGTTATTTTGGTCCAACACAGTTTTACATTGCCCTGAAATTAATTGC
TGCAGCACAATCTGGCCTCCCGGTACGGATAGAGAGTATTAAATGTGAATTGCCTCTGCCTCGCTTTATG
ATGTCAAAGAATGATGGTGAGATACGATTTGGGAACCCAGCTGAGCTGCATGGAACTAAGGTTCAGATTC
CATATTTAACTACAGAAAAAAATTCCTTCAAAAGAATGGACGATGAGGATAAACAGCAGGAAACACAGTC
TCCCACGATGTCACCCCTCGCCTCCCCTCCTTCTTCCCCGCCTCATTACCAGAGGGTGCCCTTGAGCCAT
GGCTACAGCAAACTGCGGAGCAGCGCAGAACAGATGCATCCAGCACCTTATGAAGCTAGGCAGCCCCTTG
TCCAGCCCGAGGGATCCTCATCAGGGGGCCCAGGAACCAAGCCCCTTCGGCATCAGGCTTCCCTTATCCG
GTCCTTTTCAGTGGAGAGGGAACTACAGGATAACAGCAGTTACCCCGACGAACCCTGGAGGATAACAGAA
GAACAGCGCGAGTACTATGTCAATCAGTTCCGATCCCTTCAGCCAGACCCAAGCTCTTTCATTTCAGGTT
CTGTGGCCAAGAACTTCTTCACCAAATCAAAGCTTTCCATTCCAGAACTCTCCTATATATGGGAGCTTAG
TGATGCTGACTGTGATGGAGCCCTGACCCTGCCTGAGTTCTGTGCTGCGTTTCATCTCATTGTGGCTCGG
AAGAACGGCTACCCATTGCCTGAGGGCCTCCCTCCAACTCTGCAGCCAGAATACCTGCAGGCAGCTTTTC
CTAAGCCCAAATGGGACTGTCAATTATTTGATTCTTATTCTGAGTCACTGCCGGCAAATCAACAACCTCG
TGACTTGAATCGGATGGAGAAGACATCTGTTAAAGACATGGCTGACCTTCCTGTCCCTAACCAGGATGTA
ACTAGTGATGACAAACAAGCTTTGAAAAGTACTATCAATGAAGCCTTACCAAAGGACGTGTCTGAGGATC
CAGCAACTCCCAAGGATTCCAACAGTCTCAAAGCAAGACCAAGATCCAGATCTTACTCTAGCACCTCCAT
AGAAGAGGCCATGAAAAGGGGCGAGGACCCTCCCACCCCGCCACCTCGGCCACAGAAAACCCATTCCAGA
GCCTCCTCCTTGGATCTGAATAAAGTCTTCCAGCCCAGTGTGCCAGCTACCAAGTCAGGATTGTTACCCC
CACCACCTGCGCTCCCTCCAAGACCTTGTCCATCACAGTCTGAACAAGTGTCGGAGGCCGAGTTACTCCC
ACAGCTGAGCAGAGCCCCATCCCAGGCTGCAGAAAGTAGTCCAGCAAAGAAGGATGTACTGTATTCTCAG
CCACCATCAAAGCCCATTCGTAGGAAATTCAGACCAGAAAACCAAGCTACAGAAAACCAAGAGCCTTCCA
CTGCTGCAAGTGGGCCAGCTTCTGCGGCAACCATGAAACCGCATCCAACAGTCCAAAAGCAGTCTTCCAA
ACAGAAGAAGGCCATTCAAACTGCTATCCGCAAAAATAAAGAGGCAAACGCAGTGCTGGCTCGGCTGAAC
AGTGAGCTCCAGCAGCAGCTCAAGGAGGTTCATCAAGAACGAATTGCATTGGAAAACCAATTGGAACAAC
TTCGTCCGGTCACTGTGTTGTGA

Translation (660 aa):
MEAAAAAAAAAAAAAAAGGGCGSGPPPLLLSEGEQQCYSELFARCAGAAGGGPGSGPPEAARVAPGTATA
AAGPVADLFRASQLPAETLHQITELCGAKRVGYFGPTQFYIALKLIAAAQSGLPVRIESIKCELPLPRFM
MSKNDGEIRFGNPAELHGTKVQIPYLTTEKNSFKRMDDEDKQQETQSPTMSPLASPPSSPPHYQRVPLSH
GYSKLRSSAEQMHPAPYEARQPLVQPEGSSSGGPGTKPLRHQASLIRSFSVERELQDNSSYPDEPWRITE
EQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIWELSDADCDGALTLPEFCAAFHLIVAR
KNGYPLPEGLPPTLQPEYLQAAFPKPKWDCQLFDSYSESLPANQQPRDLNRMEKTSVKDMADLPVPNQDV
TSDDKQALKSTINEALPKDVSEDPATPKDSNSLKARPRSRSYSSTSIEEAMKRGEDPPTPPPRPQKTHSR
ASSLDLNKVFQPSVPATKSGLLPPPPALPPRPCPSQSEQVSEAELLPQLSRAPSQAAESSPAKKDVLYSQ
PPSKPIRRKFRPENQATENQEPSTAASGPASAATMKPHPTVQKQSSKQKKAIQTAIRKNKEANAVLARLN
SELQQQLKEVHQERIALENQLEQLRPVTVL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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