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Report for CCDS14614.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14614.1 Public Homo sapiens X SASH3 24 110 108 CCDS HistoryNCBI Gene:54440Re-query CCDS DB by CCDS ID:14614.1Re-query CCDS DB by GeneID:54440See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14614.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000356892.4 ENSP00000349359.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000356892.4Link to Ensembl Protein Viewer:ENSP00000349359.3Re-query CCDS DB by Nucleotide ID:ENST00000356892Re-query CCDS DB by Protein ID:ENSP00000349359
Original member Current member NCBI NM_018990.4 NP_061863.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018990.4Link to Protein Sequence:NP_061863.1Re-query CCDS DB by Nucleotide ID:NM_018990Re-query CCDS DB by Protein ID:NP_061863Link to BLAST:NP_061863.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061863.1 380 O75995 380 100% 0 0

Chromosomal Locations for CCDS 14614.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 129780098 129780154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129787975 129788070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129788431 129788577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129790940 129791081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129792328 129792476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129792627 129792836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129792989 129793139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129793642 129793832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1143 nt):
ATGCTGCGCCGCAAGCCCTCCAATGCCAGTGAGAAGGAGCCCACTCAGAAGAAAAAGCTCTCCCTTCAGC
GCTCCAGCAGCTTCAAGGATTTTGCCAAATCCAAACCCAGCTCCCCCGTGGTGAGCGAGAAGGAGTTTAA
TCTGGATGATAACATTCCAGAAGATGACTCAGGTGTCCCCACCCCAGAAGATGCTGGGAAGAGTGGCAAA
AAGCTGGGGAAGAAGTGGAGGGCAGTGATTTCCCGAACCATGAACAGGAAGATGGGCAAGATGATGGTGA
AGGCCCTGTCAGAAGAGATGGCAGACACTCTGGAGGAGGGCTCTGCCTCCCCGACATCTCCAGACTACAG
CCTGGACAGCCCTGGCCCTGAGAAGATGGCGCTGGCCTTTTCTGAGCAAGAGGAGCATGAACTTCCGGTG
CTCAGCCGCCAGGCATCAACAGGCAGTGAGCTCTGCAGCCCCAGCCCAGGTTCTGGCAGCTTCGGGGAGG
AACCACCTGCCCCCCAGTACACAGGGCCTTTCTGTGGCCGGGCACGAGTCCACACCGACTTCACTCCCAG
CCCCTATGACCACGACTCGCTGAAACTGCAGAAAGGAGATGTGATCCAGATCATTGAAAAGCCACCTGTG
GGCACGTGGCTGGGCCTACTCAATGGCAAGGTGGGCTCTTTCAAATTCATCTATGTGGATGTGCTGCCCG
AGGAGGCCGTGGGGCATGCCCGCCCCAGCCGCCGACAGAGCAAGGGCAAGAGGCCCAAGCCTAAGACCCT
GCATGAGCTGCTGGAGCGCATCGGCCTGGAGGAGCACACATCCACCCTCCTGCTCAATGGCTACCAGACA
CTGGAAGACTTCAAAGAGCTGCGAGAAACACACCTCAATGAGCTGAACATCATGGATCCACAGCACCGGG
CCAAGCTGCTCACGGCCGCCGAGCTGCTGCTGGACTATGACACTGGCAGTGAGGAGGCTGAAGAGGGCGC
CGAGAGCAGCCAGGAGCCAGTGGCACACACAGTGTCGGAACCCAAGGTGGACATCCCGCGCGACTCAGGC
TGCTTTGAGGGCTCGGAGAGCGGGCGCGATGACGCAGAGCTGGCAGGCACTGAGGAGCAGCTGCAAGGCC
TCTCCCTGGCCGGGGCACCTTGA

Translation (380 aa):
MLRRKPSNASEKEPTQKKKLSLQRSSSFKDFAKSKPSSPVVSEKEFNLDDNIPEDDSGVPTPEDAGKSGK
KLGKKWRAVISRTMNRKMGKMMVKALSEEMADTLEEGSASPTSPDYSLDSPGPEKMALAFSEQEEHELPV
LSRQASTGSELCSPSPGSGSFGEEPPAPQYTGPFCGRARVHTDFTPSPYDHDSLKLQKGDVIQIIEKPPV
GTWLGLLNGKVGSFKFIYVDVLPEEAVGHARPSRRQSKGKRPKPKTLHELLERIGLEEHTSTLLLNGYQT
LEDFKELRETHLNELNIMDPQHRAKLLTAAELLLDYDTGSEEAEEGAESSQEPVAHTVSEPKVDIPRDSG
CFEGSESGRDDAELAGTEEQLQGLSLAGAP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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