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Report for CCDS14732.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14732.1 Public Homo sapiens X PDZD4 24 110 108 CCDS HistoryNCBI Gene:57595Re-query CCDS DB by CCDS ID:14732.1Re-query CCDS DB by GeneID:57595See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14732.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000164640.8 ENSP00000164640.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000164640.8Link to Ensembl Protein Viewer:ENSP00000164640.4Re-query CCDS DB by Nucleotide ID:ENST00000164640Re-query CCDS DB by Protein ID:ENSP00000164640
Original member Current member NCBI NM_032512.5 NP_115901.2 Accepted alive Link to Nucleotide Sequence:NM_032512.5Link to Protein Sequence:NP_115901.2Re-query CCDS DB by Nucleotide ID:NM_032512Re-query CCDS DB by Protein ID:NP_115901Link to BLAST:NP_115901.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115901.2 769 Q76G19-1 769 100% 0 0

Chromosomal Locations for CCDS 14732.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 153803353 153804900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 153805097 153805207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 153805505 153805606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 153806071 153806133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 153806742 153806840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 153807279 153807369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 153808360 153808595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 153830239 153830298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2310 nt):
ATGGGATGTAATATGTGCGTGGTCCAGAAACCGGAGGAGCAGTACAAAGTGATGCTGCAGGTGAACGGGA
AGGAGCTCTCCAAGCTGTCTCAGGAGCAAACTCTGCAGGCCCTGCGCTCCTCCAAGGAGCCCCTGGTGAT
CCAGGTGCTGAGACGCAGCCCCCGCCTCCGGGGGGACAGCTCCTGTCACGACCTGCAGCTGGTGGACAGT
GGCACTCAGACCGACATCACCTTCGAGCATATCATGGCGCTGGGCAAGCTGCGTCCGCCCACCCCGCCCA
TGGTCATCCTGGAGCCCCCCCCAATCAGCCATGAGTATTATGACCCGGCGGAGTTTATGGAGGGCGGCCC
GCAGGAGGCAGACCGCTTGGATGAGCTGGAGTATGAGGAGGTGGAGCTGTATAAAAGCAGCCACCGGGAC
AAGCTGGGCCTGATGGTTTGCTACCGCACGGACGACGAGGAGGACCTGGGCATTTATGTCGGAGAGGTAA
ATCCCAACAGCATTGCAGCCAAAGACGGCCGGATCCGTGAGGGAGACCGCATCATCCAGATTAACGGTGT
AGACGTCCAGAACCGGGAAGAGGCGGTGGCCATCCTGAGCCAGGAAGAGAACACCAACATCTCCCTGCTG
GTGGCCCGACCTGAGAGTCAGCTGGCGAAAAGGTGGAAGGACAGCGACCGGGATGACTTCCTGGATGACT
TTGGCTCTGAGAATGAGGGGGAGCTGCGTGCTCGTAAACTGAAATCACCCCCTGCCCAGCAGCCCGGAAA
CGAAGAGGAGAAGGGGGCTCCCGATGCCGGCCCAGGCCTGAGCAACAGCCAGGAGCTGGACAGCGGGGTG
GGCCGGACTGACGAGAGCACCCGGAACGAAGAGAGCTCTGAGCACGACCTGCTGGGGGACGAACCCCCGA
GCTCCACCAACACCCCGGGAAGCCTGCGCAAGTTTGGCCTGCAAGGGGACGCCCTGCAGAGCCGGGACTT
CCATTTCAGCATGGACTCTCTGCTGGCCGAGGGGGCGGGGCTGGGAGGGGGCGACGTCCCGGGCCTCACG
GATGAGGAGTATGAGCGCTACCGTGAGCTCCTGGAGATCAAGTGCCACCTGGAGAACGGCAACCAGCTGG
GCCTCCTCTTTCCCCGGGCCTCCGGAGGCAACAGCGCCCTGGACGTCAACCGCAACGAGAGCCTGGGCCA
CGAGATGGCCATGCTGGAGGAGGAGCTAAGGCACCTGGAATTCAAGTGCCGCAACATACTGCGGGCGCAG
AAGATGCAGCAGCTGCGTGAGCGCTGCATGAAGGCCTGGCTGCTGGAGGAGGAGAGCCTCTACGACCTGG
CGGCCAGCGAGCCCAAGAAGCACGAGCTGTCCGACATCTCCGAGCTGCCCGAGAAGTCGGACAAGGACAG
CACCAGCGCCTACAACACTGGGGAGAGCTGCCGCAGCACCCCGCTGCTTGTGGAGCCCCTGCCCGAGAGC
CCCCTGCGGCGGGCCATGGCCGGCAACTCCAACTTGAACCGGACCCCTCCCGGCCCCGCTGTTGCCACCC
CCGCCAAGGCAGCTCCTCCACCGGGGAGCCCCGCCAAGTTCCGGTCCCTCTCCCGGGATCCTGAGGCCGG
CCGGAGGCAGCACGCGGAGGAGCGCGGCCGCCGCAACCCCAAGACGGGGTTGACCCTGGAGCGTGTGGGC
CCTGAAAGCAGCCCTTACCTCTCGCGGCGCCACCGCGGCCAGGGCCAGGAGGGCGAGCACTACCACAGCT
GCGTGCAGCTGGCCCCGACGCGAGGCCTGGAGGAGCTGGGCCACGGCCCCCTGAGCTTGGCCGGTGGCCC
TCGGGTGGGCGGGGTGGCGGCCGCGGCCACTGAAGCACCGCGCATGGAGTGGAAAGTGAAGGTGCGCAGC
GACGGAACCCGCTACGTGGCCAAGCGGCCCGTGCGAGATCGGCTGCTGAAAGCCCGTGCCCTGAAGATCC
GGGAGGAGCGCAGCGGTATGACGACCGACGACGACGCGGTGAGCGAGATGAAGATGGGCCGCTACTGGAG
CAAGGAGGAGCGGAAGCAGCACCTGATCCGGGCCCGTGAGCAGCGGAAGCGGCGCGAGTTCATGATGCAG
AGCCGGCTGGAGTGCCTGCGGGAGCAGCAGAATGGCGACAGCAAGCCCGAGCTCAACATCATTGCCCTGA
GCCACCGCAAAACCATGAAGAAGCGGAACAAGAAGATCCTGGACAACTGGATCACCATCCAGGAGATGCT
GGCCCACGGCGCGCGCTCCGCCGATGGCAAGCGGGTCTACAACCCTCTTCTCTCAGTCACCACCGTGTGA

Translation (769 aa):
MGCNMCVVQKPEEQYKVMLQVNGKELSKLSQEQTLQALRSSKEPLVIQVLRRSPRLRGDSSCHDLQLVDS
GTQTDITFEHIMALGKLRPPTPPMVILEPPPISHEYYDPAEFMEGGPQEADRLDELEYEEVELYKSSHRD
KLGLMVCYRTDDEEDLGIYVGEVNPNSIAAKDGRIREGDRIIQINGVDVQNREEAVAILSQEENTNISLL
VARPESQLAKRWKDSDRDDFLDDFGSENEGELRARKLKSPPAQQPGNEEEKGAPDAGPGLSNSQELDSGV
GRTDESTRNEESSEHDLLGDEPPSSTNTPGSLRKFGLQGDALQSRDFHFSMDSLLAEGAGLGGGDVPGLT
DEEYERYRELLEIKCHLENGNQLGLLFPRASGGNSALDVNRNESLGHEMAMLEEELRHLEFKCRNILRAQ
KMQQLRERCMKAWLLEEESLYDLAASEPKKHELSDISELPEKSDKDSTSAYNTGESCRSTPLLVEPLPES
PLRRAMAGNSNLNRTPPGPAVATPAKAAPPPGSPAKFRSLSRDPEAGRRQHAEERGRRNPKTGLTLERVG
PESSPYLSRRHRGQGQEGEHYHSCVQLAPTRGLEELGHGPLSLAGGPRVGGVAAAATEAPRMEWKVKVRS
DGTRYVAKRPVRDRLLKARALKIREERSGMTTDDDAVSEMKMGRYWSKEERKQHLIRAREQRKRREFMMQ
SRLECLREQQNGDSKPELNIIALSHRKTMKKRNKKILDNWITIQEMLAHGARSADGKRVYNPLLSVTTV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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