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Report for CCDS156.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
156.1 Public Homo sapiens 1 CTRC 24 110 108 CCDS HistoryNCBI Gene:11330Re-query CCDS DB by CCDS ID:156.1Re-query CCDS DB by GeneID:11330See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 156.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000375949.5 ENSP00000365116.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000375949.5Link to Ensembl Protein Viewer:ENSP00000365116.4Re-query CCDS DB by Nucleotide ID:ENST00000375949Re-query CCDS DB by Protein ID:ENSP00000365116
Original member Current member NCBI NM_007272.3 NP_009203.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_007272.3Link to Protein Sequence:NP_009203.2Re-query CCDS DB by Nucleotide ID:NM_007272Re-query CCDS DB by Protein ID:NP_009203Link to BLAST:NP_009203.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_009203.2 268 Q99895 268 100% 0 0

Chromosomal Locations for CCDS 156.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 15438465 15438504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 15440300 15440391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 15440493 15440590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 15442447 15442572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 15443419 15443555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 15444606 15444751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 15445597 15445749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 15446575 15446589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (807 nt):
ATGTTGGGCATCACTGTCCTCGCTGCGCTCTTGGCCTGTGCCTCCAGCTGTGGGGTGCCCAGCTTCCCGC
CC
AACCTATCCGCCCGAGTGGTGGGAGGAGAGGATGCCCGGCCCCACAGCTGGCCCTGGCAGATCTCCCT
C
CAGTACCTCAAGAACGACACGTGGAGGCATACGTGTGGCGGGACTTTGATTGCTAGCAACTTCGTCCTC
ACT
GCCGCCCACTGCATCAGCAACACCCGGACCTACCGTGTGGCCGTGGGAAAGAACAACCTGGAGGTGG
AA
GACGAAGAAGGATCCCTGTTTGTGGGTGTGGACACCATCCACGTCCACAAGAGATGGAATGCCCTCCT
G
TTGCGCAATGATATTGCCCTCATCAAGCTTGCAGAGCATGTGGAGCTGAGTGACACCATCCAGGTGGCC
TGC
CTGCCAGAGAAGGACTCCCTGCTCCCCAAGGACTACCCCTGCTATGTCACCGGCTGGGGCCGCCTCT
GG
ACCAACGGCCCCATTGCTGATAAGCTGCAGCAGGGCCTGCAGCCCGTGGTGGATCACGCCACGTGCTC
C
AGGATTGACTGGTGGGGCTTCAGGGTGAAGAAAACCATGGTGTGCGCTGGGGGCGATGGCGTCATCTCA
GCC
TGCAATGGGGACTCCGGTGGCCCACTGAACTGCCAGTTGGAGAACGGTTCCTGGGAGGTGTTTGGCA
TC
GTCAGCTTTGGCTCCCGGCGGGGCTGCAACACCCGCAAGAAGCCGGTAGTCTACACCCGGGTGTCCGC
C
TACATCGACTGGATCAACGAGAAAATGCAGCTGTGA


Translation (268 aa):
MLGITVLAALLACASSCGVPSFPPNLSARVVGGEDARPHSWPWQISLQYLKNDTWRHTCGGTLIASNFVL
T
AAHCI
SNTRTYRVAVGKNNLEVEDEEGSLFVGVDTIHVHKRWNALLLRNDIALIKLAEHVELSDTIQVA
C
LPEKDSLLPKDYPCYVTGWGRLW
TNGPIADKLQQGLQPVVDHATCSRIDWWGFRVKKTMVCAGGDGVIS
A
CN
GDSGGPLNCQLENGSWEVFGIVSFGSRRGCNTRKKPVVYTRVSAYIDWINEKMQL



Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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  VEGA Genome Browser