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Report for CCDS31531.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31531.1 Public Homo sapiens 11 OR5M9 24 110 108 CCDS HistoryNCBI Gene:390162Re-query CCDS DB by CCDS ID:31531.1Re-query CCDS DB by GeneID:390162See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 31531.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000279791.1 ENSP00000279791.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000279791.1Link to Ensembl Protein Viewer:ENSP00000279791.1Re-query CCDS DB by Nucleotide ID:ENST00000279791Re-query CCDS DB by Protein ID:ENSP00000279791
Original member Current member NCBI NM_001004743.1 NP_001004743.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004743.1Link to Protein Sequence:NP_001004743.1Re-query CCDS DB by Nucleotide ID:NM_001004743Re-query CCDS DB by Protein ID:NP_001004743Link to BLAST:NP_001004743.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004743.1 310 Q8NGP3 310 100% 0 0

Chromosomal Locations for CCDS 31531.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 56462469 56463401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (933 nt):
ATGCCTAATTTCACGGATGTGACAGAATTTACTCTCCTGGGGCTGACCTGTCGTCAGGAGCTACAGGTTC
TCTTTTTTGTGGTGTTCCTAGCGGTTTACATGATCACTCTGTTGGGAAATATTGGTATGATCATTTTGAT
TAGCATCAGTCCTCAGCTTCAGAGTCCCATGTACTTTTTCCTGAGTCATCTGTCTTTTGCGGACGTGTGC
TTCTCCTCCAACGTTACCCCCAAAATGCTGGAAAACTTATTATCAGAGACAAAAACCATTTCCTATGTGG
GATGCTTGGTGCAGTGCTACTTTTTCATTGCCGTTGTCCACGTGGAGGTCTATATCCTGGCTGTGATGGC
CTTTGACAGGTACATGGCCGGCTGCAACCCTCTGCTTTATGGCAGTAAAATGTCTAGGACTGTGTGTGTT
CGGCTCATCTCTGTGCCTTATGTCTATGGATTCTCTGTCAGCCTAATATGCACACTATGGACTTATGGCT
TATACTTCTGTGGAAACTTTGAAATCAATCACTTCTATTGTGCAGATCCCCCTCTCATCCAGATTGCCTG
TGGGAGAGTGCACATCAAAGAAATCACAATGATTGTTATTGCTGGAATTAACTTCACATATTCCCTCTCG
GTGGTCCTCATCTCCTACACTCTCATTGTAGTAGCTGTGCTACGCATGCGCTCTGCCGATGGCAGGAGGA
AGGCGTTCTCCACCTGTGGGTCCCACTTGACGGCTGTTTCTATGTTTTATGGGACCCCCATCTTCATGTA
TCTCAGGAGACCCACTGAGGAATCCGTAGAGCAGGGCAAAATGGTGGCTGTGTTTTACACCACAGTAATT
CCTATGTTGAATCCCATGATCTACAGTCTGAGAAATAAGGATGTAAAAGAAGCAGTCAACAAAGCAATCA
CCAAGACATATGTGAGGCAGTAA

Translation (310 aa):
MPNFTDVTEFTLLGLTCRQELQVLFFVVFLAVYMITLLGNIGMIILISISPQLQSPMYFFLSHLSFADVC
FSSNVTPKMLENLLSETKTISYVGCLVQCYFFIAVVHVEVYILAVMAFDRYMAGCNPLLYGSKMSRTVCV
RLISVPYVYGFSVSLICTLWTYGLYFCGNFEINHFYCADPPLIQIACGRVHIKEITMIVIAGINFTYSLS
VVLISYTLIVVAVLRMRSADGRRKAFSTCGSHLTAVSMFYGTPIFMYLRRPTEESVEQGKMVAVFYTTVI
PMLNPMIYSLRNKDVKEAVNKAITKTYVRQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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