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Report for CCDS31604.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31604.1 Public Homo sapiens 11 NAALADL1 24 110 108 CCDS HistoryNCBI Gene:10004Re-query CCDS DB by CCDS ID:31604.1Re-query CCDS DB by GeneID:10004See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31604.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358658.8 ENSP00000351484.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000358658.8Link to Ensembl Protein Viewer:ENSP00000351484.3Re-query CCDS DB by Nucleotide ID:ENST00000358658Re-query CCDS DB by Protein ID:ENSP00000351484
Original member Current member NCBI NM_005468.3 NP_005459.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005468.3Link to Protein Sequence:NP_005459.2Re-query CCDS DB by Nucleotide ID:NM_005468Re-query CCDS DB by Protein ID:NP_005459Link to BLAST:NP_005459.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005459.2 740 Q9UQQ1-1 740 100% 0 0

Chromosomal Locations for CCDS 31604.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 65045271 65045457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65045822 65045914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65046027 65046114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65046189 65046362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65046445 65046526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65047475 65047565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65047647 65047738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65047981 65048048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65048152 65048215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65048300 65048385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65053218 65053337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65053491 65053576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65054250 65054354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65054455 65054738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65057371 65057493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65057875 65057996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65058078 65058250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65058337 65058521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2223 nt):
ATGCAGTGGACGAAGGTGTTGGGGCTGGGGCTGGGGGCTGCTGCCCTCTTGGGGCTGGGGATCATCCTCG
GCCACTTTGCCATCCCCAAAAAAGCCAACTCACTGGCCCCCCAGGACCTGGACCTGGAGATCCTGGAGAC
CGTCATGGGGCAGCTGGATGCCCACAGGATCCGGGAGAACCTCAGAGAACTCTCCAGGGAGCCACACCTG
GCCTCCAGCCCTCGGGATGAGGACCTGGTGCAGCTGCTGCTGCAGCGCTGGAAGGACCCAGAGTCAGGCC
TGGACTCGGCCGAGGCCTCCACGTACGAAGTGCTGCTGTCCTTCCCTAGCCAGGAGCAGCCCAACGTCGT
GGACATCGTGGGCCCCACTGGGGGCATCATCCACTCCTGCCACCGGACTGAGGAGAACGTGACCGGGGAG
CAAGGGGGGCCAGATGTGGTACAACCCTATGCTGCCTATGCTCCTTCTGGAACCCCACAGGGCCTCCTCG
TCTATGCCAACCGGGGCGCGGAAGAAGACTTTAAGGAGCTACAGACTCAGGGCATCAAACTTGAAGGCAC
CATTGCCCTGACTCGATATGGGGGTGTAGGGCGTGGGGCCAAGGCTGTGAACGCTGCCAAGCACGGGGTA
GCTGGGGTGCTGGTGTACACAGACCCTGCCGACATCAACGATGGGCTGAGCTCACCCGACGAAACCTTTC
CCAACTCCTGGTACCTGCCCCCCTCAGGAGTGGAGCGAGGCTCCTACTACGAGTATTTTGGGGACCCTCT
GACTCCCTACCTTCCAGCCGTCCCCTCTTCCTTCCGCGTGGACCTTGCCAATGTCTCCGGATTTCCCCCA
ATTCCTACACAGCCCATTGGCTTCCAGGATGCAAGAGACCTGCTCTGTAACCTCAACGGAACTTTGGCCC
CAGCCACCTGGCAGGGAGCACTGGGCTGCCACTACAGGTTGGGTCCCGGCTTCCGGCCTGACGGAGACTT
CCCAGCAGACAGCCAGGTGAATGTGAGCGTCTACAACCGCCTGGAGCTGAGGAACTCTTCCAACGTCCTG
GGCATCATCCGTGGGGCTGTGGAGCCTGATCGCTACGTGCTGTATGGGAACCACCGAGACAGCTGGGTGC
ACGGGGCTGTGGACCCCAGCAGTGGCACCGCCGTCCTCCTGGAGCTCTCCCGTGTCCTGGGGACCCTGCT
GAAGAAGGGCACCTGGCGTCCTCGCAGATCAATCGTGTTTGCGAGCTGGGGGGCTGAGGAGTTTGGGCTC
ATTGGCTCCACGGAATTCACAGAAGAGTTCTTCAACAAGCTGCAGGAGCGCACGGTGGCCTACATCAACG
TGGACATCTCGGTGTTTGCCAACGCTACCCTTAGGGTGCAGGGGACGCCCCCTGTCCAGAGCGTCGTCTT
CTCTGCAACCAAAGAGATCCGCTCACCAGGCCCTGGCGACCTGAGCATCTACGACAACTGGATCCGGTAC
TTCAACCGCAGCAGCCCGGTGTACGGCCTGGTCCCCAGCTTGGGTTCTCTGGGTGCTGGCAGCGACTATG
CACCCTTCGTTCACTTCCTGGGCATCTCCTCCATGGACATTGCCTATACCTATGACCGGAGCAAGACTTC
AGCCAGGATCTACCCCACCTACCACACAGCCTTTGACACCTTTGACTATGTGGACAAGTTTTTGGACCCG
GGCTTCAGCAGCCATCAGGCTGTGGCCCGGACAGCGGGGAGTGTGATTCTCCGGCTCAGTGACAGCTTCT
TCCTGCCCCTCAAAGTCAGTGACTACAGTGAGACACTCCGCAGCTTCCTGCAGGCAGCCCAGCAAGATCT
TGGGGCCCTGCTGGAGCAGCACAGCATCAGCCTGGGGCCTCTGGTGACTGCAGTGGAGAAGTTTGAGGCA
GAAGCTGCAGCCTTGGGCCAACGCATATCAACACTGCAGAAGGGCAGCCCTGACCCCCTGCAGGTCCGGA
TGCTCAATGACCAGTTGATGCTCTTGGAACGGACCTTTCTGAACCCTAGAGCCTTCCCAGAGGAACGCTA
CTACAGCCATGTGCTCTGGGCACCTCGCACGGGCTCCGTAGTCACATTCCCGGGCCTATCCAATGCCTGC
TCCAGGGCCAGGGACACAGCTTCTGGATCTGAAGCTTGGGCTGAGGTCCAGAGACAGCTCAGCATTGTGG
TGACAGCCCTGGAGGGTGCGGCAGCCACCCTGAGGCCTGTGGCTGACCTCTGA

Translation (740 aa):
MQWTKVLGLGLGAAALLGLGIILGHFAIPKKANSLAPQDLDLEILETVMGQLDAHRIRENLRELSREPHL
ASSPRDEDLVQLLLQRWKDPESGLDSAEASTYEVLLSFPSQEQPNVVDIVGPTGGIIHSCHRTEENVTGE
QGGPDVVQPYAAYAPSGTPQGLLVYANRGAEEDFKELQTQGIKLEGTIALTRYGGVGRGAKAVNAAKHGV
AGVLVYTDPADINDGLSSPDETFPNSWYLPPSGVERGSYYEYFGDPLTPYLPAVPSSFRVDLANVSGFPP
IPTQPIGFQDARDLLCNLNGTLAPATWQGALGCHYRLGPGFRPDGDFPADSQVNVSVYNRLELRNSSNVL
GIIRGAVEPDRYVLYGNHRDSWVHGAVDPSSGTAVLLELSRVLGTLLKKGTWRPRRSIVFASWGAEEFGL
IGSTEFTEEFFNKLQERTVAYINVDISVFANATLRVQGTPPVQSVVFSATKEIRSPGPGDLSIYDNWIRY
FNRSSPVYGLVPSLGSLGAGSDYAPFVHFLGISSMDIAYTYDRSKTSARIYPTYHTAFDTFDYVDKFLDP
GFSSHQAVARTAGSVILRLSDSFFLPLKVSDYSETLRSFLQAAQQDLGALLEQHSISLGPLVTAVEKFEA
EAAALGQRISTLQKGSPDPLQVRMLNDQLMLLERTFLNPRAFPEERYYSHVLWAPRTGSVVTFPGLSNAC
SRARDTASGSEAWAEVQRQLSIVVTALEGAAATLRPVADL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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