CCDS Report for Consensus CDS

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Report for CCDS33706.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
33706.1	Public	Homo sapiens	3	C3orf20	24	110	108

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33706.1

Original	Current	Source	Nucleotide ID	Protein ID	MANE	Status in CCDS	Seq. Status	Links
		EBI	ENST00000253697.8	ENSP00000253697.3	MANE Select	Accepted	alive
		NCBI	NM_032137.5	NP_115513.4	MANE Select	Accepted	alive

RefSeq	Length	Related UniProtKB/SwissProt	Length	Identity	Gaps	Mismatches
NP_115513.4	904	Q8ND61-1	904	100%	0	0

Chromosomal Locations for CCDS 33706.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)

Genome Browser links:

Chromosome	Start	Stop
3	14682714	14683197
3	14684242	14684382
3	14689997	14690116
3	14703130	14703262
3	14704337	14704618
3	14714007	14714159
3	14715289	14715409
3	14721653	14721784
3	14726901	14727024
3	14728439	14728688
3	14757371	14757674
3	14759891	14759998
3	14761473	14761615
3	14772067	14772201
3	14772791	14772875

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2715 nt):
ATGAGTTACATCAAGAGTAACCTAGAATTATATCAGCAATACACAGCCATGGCCCCCAAGCTACTGGCCC GCATCTCCAAACTCCTCATGATCTGCCAGAATGCAGGCATTTCTGTACCAAAAGGCATCAGAAACATCTT TGAGTTCACTTGGGAAGAGCTCATCAGTGACCCTTCAGTGCCTACCCCGTCCGACATCTTGGGCCTGGAG GTCAGCTTTGGAGCCCCCCTGGTGGTGCTCATGGAACCCACCTTTGTGCAGGTCCCCACACTGAAGAAGC CACTACCTCCACCACCACCAGCACCACCACGTCCAGTGCTGCTGGCAACCACTGGGGCAGCCAAGCGCTC CACCCTCTCTCCCACCATGGCCCGTCAGGTGCGCACCCACCAGGAGACCCTGAACAGGTTTCAGCAGCAG TCCATCCACCTGCTGACGGAGCTCCTCAGACTGAAGATGAAGGCCATGGTGGAGTCTATGTCGGTGGGTG CCAACCCCTTGGACATCACCAGGCGCTTTGTGGAGGCCAGCCAGCTCCTCCACCTCAATGCCAAGGAGAT GGCCTTCAACTGCCTGATCAGCACAGCCGGGAGAAGTGGCTACAGCAGCGGACAGTTGTGGAAAGAGTCC CTCGCAAACATGTCCGCCATTGGGGTGAACTCGCCTTACCAGCTGATCTACCACTCTTCCACAGCCTGTC TGAGCTTTTCTCTCTCTGCTGGAAAAGAAGCCAAGAAGAAAATAGGCAAATCTAGAACTACAGAAGATGT CAGCATGCCGCCCCTGCATCGAGGAGTGGGAACCCCTGCCAACAGCCTGGAGTTCAGCGACCCCTGCCCT GAGGCCCGGGAGAAGCTGCAGGAGTTGTGTCGCCACATAGAAGCTGAAAGGGCCACATGGAAAGGGAGGA ATATCTCCTACCCCATGATCTTACGAAACTACAAGGCAAAGATGCCCTCTCATCTAATGTTGGCCCGCAA AGGAGACTCTCAGACCCCGGGTTTACATTACCCTCCCACTGCAGGTGCTCAGACTCTCAGCCCCACCTCT CACCCATCTTCTGCCAACCATCATTTCAGTCAGCATTGTCAAGAGGGGAAGGCACCCAAGAAGGCCTTCA AGTTTCATTACACCTTCTATGATGGCTCCTCCTTCGTTTACTATCCCTCTGGAAACGTCGCTGTATGTCA GATCCCCACATGCTGCAGAGGGAGAACCATCACCTGCCTCTTTAATGACATACCTGGATTCTCCTTGCTG GCCCTATTCAATACTGAAGGCCAGGGCTGTGTTCACTACAACCTAAAAACCAGTTGCCCATATGTCTTAA TCTTGGATGAGGAAGGTGGGACCACCAATGACCAGCAGGGCTATGTAGTCCACAAGTGGAGCTGGACTTC CAGGACAGAGACCCTGCTTTCCCTGGAATACAAGGTGAATGAGGAAATGAAACTAAAGGTACTGGGACAG GACTCCATCACAGTCACCTTCACCTCCCTGAATGAGACAGTAACACTCACTGTGTCGGCCAACAATTGTC CCCATGGAATGGCATATGACAAACGGCTGAACCGCAGAATCAGCAACATGGACGACAAGGTGTATAAGAT GAGCCGAGCCCTGGCTGAGATCAAGAAGCGGTTTCAGAAGACAGTGACTCAGTTCATTAATTCTATCTTG CTGGCCGCAGGTCTGTTTACCATTGAATATCCCACCAAAAAGGAGGAGGAAGAATTTGTTCGGTTCAAGA TGAGATCCAGAACTCATCCCGAGCGGCTCCCCAAGCTAAGTTTATACTCAGGAGAAAGTCTTTTACGATC TCAGTCAGGCCACCTGGAATCCTCAATTGCAGAGACTTTGAAGGATGAGCCTGAGTCTGCTCCTGTGAGC CCAGTTCGGAAGACCACCAAAATCCACACCAAAGCCAAGGTCACATCCAGAGGGAAGGCCCGCGAGGGGC GCAGCCCCACCAGGTGGGCGGCCTTGCCCTCAGACTGCCCGCTGGTGCTGCGGAAGCTCATGCTCAAGGA AGACACCCGTGCTGGCTGCAAGTGCCTGGTGAAGGCGCCCCTGGTCTCTGACGTGGAGCTGGAGCGCTTC CTGTTGGCGCCCCGAGACCCCAGCCAAGTGCTGGTGTTTGGGATCATCTCAAGCCAGAACTACACCAGCA CTGGGCAGCTCCAGTGGCTGCTGAACACTCTCTACAACCACCAGCAGCGGGGCCGTGGCTCCCCCTGCAT CCAGTGCCGGTATGACTCCTACCGCCTGCTGCAGTATGACCTGGACAGCCCCCTGCAGGAGGACCCTCCC CTGATGGTGAAGAAGAACTCTGTGGTGCAGGGGATGATTCTGATGTTTGCCGGGGGGAAGCTCATTTTTG GGGGCCGTGTTTTGAATGGATATGGCCTCAGCAAGCAGAATCTGCTGAAACAGATCTTCCGGTCTCAACA GGATTACAAGATGGGCTACTTCCTGCCGGATGACTACAAATTCAGTGTTCCCAACTCTGTCCTGAGCCTG GAGGATTCTGAATCAGTCAAGAAAGCCGAGTCAGAAGATATCCAAGGAAGCAGCTCCTCATTGGCCCTGG AAGACTATGTGGAGAAGGAGTTATCTCTGGAGGCTGAGAAGACAAGAGAGCCTGAAGTGGAGCTACATCC TCTCAGCAGGGACAGCAAGATAACTAGTTGGAAGAAGCAGGCCTCCAAGAAGTAG
Translation (904 aa):
MSYIKSNLELYQQYTAMAPKLLARISKLLMICQNAGISVPKGIRNIFEFTWEELISDPSVPTPSDILGLE VSFGAPLVVLMEPTFVQVPTLKKPLPPPPPAPPRPVLLATTGAAKRSTLSPTMARQVRTHQETLNRFQQQ SIHLLTELLRLKMKAMVESMSVGANPLDITRRFVEASQLLHLNAKEMAFNCLISTAGRSGYSSGQLWKES LANMSAIGVNSPYQLIYHSSTACLSFSLSAGKEAKKKIGKSRTTEDVSMPPLHRGVGTPANSLEFSDPCP EAREKLQELCRHIEAERATWKGRNISYPMILRNYKAKMPSHLMLARKGDSQTPGLHYPPTAGAQTLSPTS HPSSANHHFSQHCQEGKAPKKAFKFHYTFYDGSSFVYYPSGNVAVCQIPTCCRGRTITCLFNDIPGFSLL ALFNTEGQGCVHYNLKTSCPYVLILDEEGGTTNDQQGYVVHKWSWTSRTETLLSLEYKVNEEMKLKVLGQ DSITVTFTSLNETVTLTVSANNCPHGMAYDKRLNRRISNMDDKVYKMSRALAEIKKRFQKTVTQFINSIL LAAGLFTIEYPTKKEEEEFVRFKMRSRTHPERLPKLSLYSGESLLRSQSGHLESSIAETLKDEPESAPVS PVRKTTKIHTKAKVTSRGKAREGRSPTRWAALPSDCPLVLRKLMLKEDTRAGCKCLVKAPLVSDVELERF LLAPRDPSQVLVFGIISSQNYTSTGQLQWLLNTLYNHQQRGRGSPCIQCRYDSYRLLQYDLDSPLQEDPP LMVKKNSVVQGMILMFAGGKLIFGGRVLNGYGLSKQNLLKQIFRSQQDYKMGYFLPDDYKFSVPNSVLSL EDSESVKKAESEDIQGSSSSLALEDYVEKELSLEAEKTREPEVELHPLSRDSKITSWKKQASKK

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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