NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS44505.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44505.1 Public Homo sapiens 11 RASSF7 24 110 108 CCDS HistoryNCBI Gene:8045Re-query CCDS DB by CCDS ID:44505.1Re-query CCDS DB by GeneID:8045See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44505.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000454668.2 ENSP00000405606.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000454668.2Link to Ensembl Protein Viewer:ENSP00000405606.2Re-query CCDS DB by Nucleotide ID:ENST00000454668Re-query CCDS DB by Protein ID:ENSP00000405606
Original member Current member NCBI NM_001143994.2 NP_001137466.1 Accepted alive Link to Nucleotide Sequence:NM_001143994.2Link to Protein Sequence:NP_001137466.1Re-query CCDS DB by Nucleotide ID:NM_001143994Re-query CCDS DB by Protein ID:NP_001137466Link to BLAST:NP_001137466.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001137466.1 320 Q02833-3 320 100% 0 0

Chromosomal Locations for CCDS 44505.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 561769 561892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 562079 562776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 563189 563317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 563558 563569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (963 nt):
ATGTTGTTGGGACTGGCGGCCATGGAGCTGAAGGTGTGGGTGGATGGCATCCAGCGTGTGGTCTGTGGGG
TCTCAGAGCAGACCACCTGCCAGGAAGTGGTCATCGCACTAGCCCAAGCAATAGGCCAGACTGGCCGCTT
TGTGCTTGTGCAGCGGCTTCGGGAGAAGGAGCGGCAGTTGCTGCCACAAGAGTGTCCAGTGGGCGCCCAG
GCCACCTGCGGACAGTTTGCCAGCGATGTCCAGTTTGTCCTGAGGCGCACAGGGCCCAGCCTAGCTGGGA
GGCCCTCCTCAGACAGCTGTCCACCCCCGGAACGCTGCCTAATTCGTGCCAGCCTCCCTGTAAAGCCACG
GGCTGCGCTGGGCTGTGAGCCCCGCAAAACACTGACCCCCGAGCCAGCCCCCAGCCTCTCACGCCCTGGG
CCTGCGGCCCCTGTGACACCCACACCAGGCTGCTGCACAGACCTGCGGGGCCTGGAGCTCAGGGTGCAGA
GGAATGCTGAGGAGCTGGGCCATGAGGCCTTCTGGGAGCAAGAGCTGCGCCGGGAGCAGGCCCGGGAGCG
AGAGGGACAGGCACGCCTGCAGGCACTAAGTGCGGCCACTGCTGAGCATGCCGCCCGGCTGCAGGCCCTG
GACGCTCAGGCCCGTGCCCTGGAGGCTGAGCTGCAGCTGGCAGCGGAGGCCCCTGGGCCCCCCTCACCTA
TGGCATCTGCCACTGAGCGCCTGCACCAGGACCTGGCTGTTCAGGAGCGGCAGAGTGCGGAGGTGCAGGG
CAGCCTGGCTCTGGTGAGCCGGGCCCTGGAGGCAGCAGAGCGAGCCTTGCAGGCTCAGGCTCAGGAGCTG
GAGGAGCTGAACCGAGAGCTCCGTCAGTGCAACCTGCAGCAGTTCATCCAGCAGACCGGGGCTGCGCTGC
CACCGCCCCCACGGCCTGACAGGGGCCCTCCTGGCACTCAGTGGCCCCCATGA

Translation (320 aa):
MLLGLAAMELKVWVDGIQRVVCGVSEQTTCQEVVIALAQAIGQTGRFVLVQRLREKERQLLPQECPVGAQ
ATCGQFASDVQFVLRRTGPSLAGRPSSDSCPPPERCLIRASLPVKPRAALGCEPRKTLTPEPAPSLSRPG
PAAPVTPTPGCCTDLRGLELRVQRNAEELGHEAFWEQELRREQAREREGQARLQALSAATAEHAARLQAL
DAQARALEAELQLAAEAPGPPSPMASATERLHQDLAVQERQSAEVQGSLALVSRALEAAERALQAQAQEL
EELNRELRQCNLQQFIQQTGAALPPPPRPDRGPPGTQWPP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH