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Report for CCDS44686.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44686.1 Public Homo sapiens 11 MAP6 24 110 108 CCDS HistoryNCBI Gene:4135Re-query CCDS DB by CCDS ID:44686.1Re-query CCDS DB by GeneID:4135See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44686.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000434603.2 ENSP00000415108.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000434603.2Link to Ensembl Protein Viewer:ENSP00000415108.2Re-query CCDS DB by Nucleotide ID:ENST00000434603Re-query CCDS DB by Protein ID:ENSP00000415108
Original member Current member NCBI NM_207577.1 NP_997460.1 Accepted alive Link to Nucleotide Sequence:NM_207577.1Link to Protein Sequence:NP_997460.1Re-query CCDS DB by Nucleotide ID:NM_207577Re-query CCDS DB by Protein ID:NP_997460Link to BLAST:NP_997460.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997460.1 439 Q96JE9-2 439 100% 0 0

Chromosomal Locations for CCDS 44686.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 75605804 75606004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 75608109 75608322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 75667465 75668369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1320 nt):
ATGGCGTGGCCGTGCATCACGAGGGCCTGCTGCATCGCCCGCTTCTGGAACCAGTTGGACAAAGCGGACA
TCGCTGTGCCGCTGGTTTTCACCAAGTACTCGGAGGCCACCGAGCACCCGGGCGCCCCGCCGCAGCCACC
GCCGCCGCAGCAGCAGGCGCAGCCGGCGCTCGCGCCCCCCTCGGCGCGCGCGGTTGCCATAGAGACGCAG
CCAGCCCAGGGCGAGTTGGATGCAGTTGCCCGGGCAACGGGGCCAGCGCCTGGGCCTACCGGCGAGCGCG
AGCCGGCGGCGGGCCCCGGCCGGAGCGGGCCGGGCCCGGGCCTGGGCTCCGGCTCCACCTCCGGCCCCGC
GGACTCGGTGATGCGGCAGGATTACCGAGCCTGGAAGGTGCAGCGGCCCGAGCCCAGCTGCCGGCCGCGC
AGCGAATACCAGCCCTCCGACGCTCCCTTCGAGCGCGAGACCCAGTACCAGAAGGACTTCCGCGCCTGGC
CGCTGCCGCGCCGCGGGGACCACCCGTGGATCCCCAAGCCCGTGCAGATCTCTGCGGCCTCCCAGGCGTC
GGCGCCCATTCTCGGGGCGCCCAAGCGCCGGCCGCAGAGCCAGGAGCGCTGGCCAGTGCAGGCCGCCGCT
GAGGCCCGGGAGCAGGAGGCGGCCCCCGGCGGAGCGGGTGGCCTGGCGGCCGGAAAGGCGTCCGGGGCGG
ACGAGCGCGACACGCGCAGGAAGGCCGGGCCTGCCTGGATTGTGCGCCGCGCCGAGGGCCTGGGGCACGA
GCAGACGCCGCTGCCCGCGGCCCAGGCCCAGGTCCAGGCCACCGGCCCCGAGGCTGGCAGGGGGCGCGCC
GCGGCGGACGCCCTCAACCGGCAAATCCGCGAGGAGGTGGCGAGTGCAGTGAGCAGCTCCTACAGGAATG
AATTCAGGGCATGGACGGACATCAAGCCTGTGAAACCAATAAAGGCCAAGCCCCAGTACAAGCCCCCAGA
TGATAAGATGGTTCATGAGACCAGCTACAGTGCTCAGTTCAAAGGAGAGGCCAGCAAGCCAACAACAGCT
GACAATAAGGTCATTGATCGCAGAAGAATACGCAGCCTCTACAGCGAACCCTTCAAGGAACCCCCAAAGG
TGGAAAAACCTAGTGTTCAGAGTTCCAAACCAAAAAAGACCTCAGCGAGCCATAAGCCCACGAGGAAGGC
CAAAGACAAGCAGGCGGTGTCAGGCCAGGCTGCCAAGAAAAAGAGCGCGGAGGGCCCGAGTACCACCAAG
CCAGACGACAAGGAGCAAAGCAAAGAGATGAACAATAAACTGGCTGAGGCGAAAGAGTAA

Translation (439 aa):
MAWPCITRACCIARFWNQLDKADIAVPLVFTKYSEATEHPGAPPQPPPPQQQAQPALAPPSARAVAIETQ
PAQGELDAVARATGPAPGPTGEREPAAGPGRSGPGPGLGSGSTSGPADSVMRQDYRAWKVQRPEPSCRPR
SEYQPSDAPFERETQYQKDFRAWPLPRRGDHPWIPKPVQISAASQASAPILGAPKRRPQSQERWPVQAAA
EAREQEAAPGGAGGLAAGKASGADERDTRRKAGPAWIVRRAEGLGHEQTPLPAAQAQVQATGPEAGRGRA
AADALNRQIREEVASAVSSSYRNEFRAWTDIKPVKPIKAKPQYKPPDDKMVHETSYSAQFKGEASKPTTA
DNKVIDRRRIRSLYSEPFKEPPKVEKPSVQSSKPKKTSASHKPTRKAKDKQAVSGQAAKKKSAEGPSTTK
PDDKEQSKEMNNKLAEAKE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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