CCDS Report for Consensus CDS

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Report for CCDS45592.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
45592.1	Public	Homo sapiens	17	RABEP1	24	110	108

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45592.1

Original	Current	Source	Nucleotide ID	Protein ID	MANE	Status in CCDS	Seq. Status	Links
		EBI	ENST00000537505.6	ENSP00000445408.2	MANE Select	Accepted	alive
		NCBI	NM_004703.6	NP_004694.2	MANE Select	Accepted	alive

RefSeq	Length	Related UniProtKB/SwissProt	Length	Identity	Gaps	Mismatches
NP_004694.2	862	Q15276-1	862	100%	0	0

Chromosomal Locations for CCDS 45592.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)

Genome Browser links:

Chromosome	Start	Stop
17	5282487	5282520
17	5308694	5308822
17	5331949	5332152
17	5335184	5335344
17	5338019	5338138
17	5346790	5346925
17	5350451	5350629
17	5354359	5354490
17	5361208	5361675
17	5362912	5363016
17	5365122	5365238
17	5368370	5368468
17	5373314	5373454
17	5377116	5377305
17	5378177	5378232
17	5380364	5380462
17	5381389	5381505
17	5383122	5383223

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2589 nt):
ATGGCGCAGCCGGGCCCGGCTTCCCAGCCTGACGTTTCTCTTCAGCAACGGGTAGCAGAATTGGAAAAAA TTAATGCAGAATTTTTACGTGCACAACAGCAGCTTGAACAAGAATTTAATCAAAAGAGAGCAAAATTTAA GGAGTTATATTTGGCTAAAGAGGAGGATCTGAAGAGGCAAAATGCAGTATTACAAGCTGCACAAGATGAT TTGGGACACCTTCGAACCCAGCTGTGGGAAGCTCAAGCAGAGATGGAGAATATTAAGGCGATTGCCACAG TCTCTGAGAACACCAAGCAAGAAGCTATAGATGAAGTGAAAAGACAGTGGAGAGAAGAAGTTGCTTCACT TCAGGCTGTTATGAAAGAAACAGTTCGTGACTATGAGCACCAGTTCCACCTTAGGCTGGAGCAGGAGCGA ACACAGTGGGCACAGTATAGAGAATCCGCAGAGAGGGAAATAGCTGATTTAAGAAGAAGGCTGTCTGAAG GTCAAGAGGAGGAAAATTTAGAAAATGAAATGAAAAAGGCCCAAGAGGATGCTGAGAAACTTCGGTCCGT TGTGATGCCAATGGAAAAGGAAATTGCAGCTTTGAAGGATAAACTGACAGAGGCTGAAGACAAAATTAAA GAGCTGGAGGCCTCAAAGGTTAAAGAACTGAATCATTATCTGGAAGCTGAGAAATCTTGTAGGACTGATC TAGAGATGTATGTAGCTGTTTTGAATACTCAGAAATCTGTTCTACAGGAAGATGCTGAGAAACTGCGGAA AGAATTGCATGAAGTTTGCCATCTCTTGGAGCAAGAGCGACAACAACACAACCAGTTAAAACATACGTGG CAGAAGGCCAATGACCAGTTTCTGGAATCTCAGCGTTTACTGATGAGAGACATGCAGCGAATGGAGATTG TGCTAACTTCAGAACAGCTCCGACAAGTTGAAGAACTGAAGAAGAAAGATCAGGAGGATGATGAACAACA AAGACTCAATAAGAGAAAGGATCACAAAAAAGCAGATGTTGAGGAAGAAATAAAAATACCAGTAGTGTGT GCTTTAACTCAAGAAGAATCTTCAGCCCAGTTATCAAATGAAGAGGAGCATTTAGACAGCACCCGTGGCT CAGTTCATTCCTTAGATGCAGGCTTGCTGTTGCCATCTGGAGATCCTTTCAGTAAATCGGACAATGACAT GTTTAAAGATGGACTCAGGAGAGCACAGTCTACAGACAGCTTGGGAACCTCGGGCTCATTGCAATCCAAA GCTTTAGGCTATAACTACAAAGCAAAATCTGCTGGAAACCTGGACGAGTCAGATTTTGGACCACTGGTAG GAGCAGATTCAGTGTCTGAGAACTTTGATACTGCATCCCTTGGGTCACTCCAGATGCCAAGTGGGTTTAT GTTAACCAAAGATCAGGAAAGAGCAATCAAGGCGATGACACCAGAACAAGAAGAGACAGCGTCCCTCCTC TCCAGCGTTACCCAGGGCATGGAGAGTGCCTATGTGTCCCCTAGTGGTTATCGTTTAGTTAGTGAAACAG AATGGAATCTCTTGCAGAAAGAGGTACATAATGCTGGAAATAAACTTGGTAGACGTTGTGATATGTGTTC CAATTACGAAAAACAGTTACAAGGAATTCAGATTCAGGAGGCTGAAACGAGAGACCAGGTGAAAAAACTA CAGCTGATGCTAAGGCAAGCTAATGACCAGTTAGAGAAGACAATGAAAGATAAGCAGGAGCTGGAAGACT TCATAAAGCAAAGCAGCGAAGATTCGAGTCACCAGATCTCTGCACTCGTCCTAAGAGCCCAGGCCTCCGA GATCTTACTTGAAGAGTTACAGCAGGGGCTTTCCCAGGCAAAGAGGGATGTTCAGGAACAGATGGCGGTG CTGATGCAGTCACGGGAACAGGTTTCAGAAGAGCTGGTGAGGTTACAGAAAGATAATGACAGTCTCCAGG GAAAGCACAGCCTGCATGTGTCATTACAGCAAGCAGAAGACTTCATCCTCCCAGACACTACAGAGGCACT GCGGGAGTTGGTATTAAAATACCGTGAGGACATCATTAATGTGCGGACAGCAGCAGACCACGTAGAAGAA AAGCTGAAGGCTGAGATACTTTTCCTAAAAGAGCAGATCCAAGCAGAACAGTGTTTAAAAGAAAATCTTG AAGAAACTCTGCAACTAGAAATAGAAAACTGCAAGGAGGAAATAGCTTCTATTTCTAGCCTAAAAGCTGA ATTAGAAAGAATAAAAGTGGAAAAAGGACAGTTGGAGTCCACATTAAGAGAGAAGTCTCAACAGCTTGAG AGTCTTCAGGAAATAAAGATCAGTTTGGAAGAGCAGTTAAAGAAAGAGACTGCTGCTAAGGCTACCGTTG AACAACTAATGTTTGAAGAGAAGAATAAAGCTCAGAGATTACAGACAGAATTAGATGTCAGTGAGCAAGT CCAGAGGGATTTTGTAAAGCTTTCACAGACCCTTCAGGTGCAGTTAGAGCGGATCCGGCAAGCTGACTCC TTGGAGAGAATCCGGGCAATTCTGAATGATACTAAACTGACAGACATTAACCAGCTTCCTGAGACATGA
Translation (862 aa):
MAQPGPASQPDVSLQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELYLAKEEDLKRQNAVLQAAQDD LGHLRTQLWEAQAEMENIKAIATVSENTKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHLRLEQER TQWAQYRESAEREIADLRRRLSEGQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIK ELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTW QKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEDDEQQRLNKRKDHKKADVEEEIKIPVVC ALTQEESSAQLSNEEEHLDSTRGSVHSLDAGLLLPSGDPFSKSDNDMFKDGLRRAQSTDSLGTSGSLQSK ALGYNYKAKSAGNLDESDFGPLVGADSVSENFDTASLGSLQMPSGFMLTKDQERAIKAMTPEQEETASLL SSVTQGMESAYVSPSGYRLVSETEWNLLQKEVHNAGNKLGRRCDMCSNYEKQLQGIQIQEAETRDQVKKL QLMLRQANDQLEKTMKDKQELEDFIKQSSEDSSHQISALVLRAQASEILLEELQQGLSQAKRDVQEQMAV LMQSREQVSEELVRLQKDNDSLQGKHSLHVSLQQAEDFILPDTTEALRELVLKYREDIINVRTAADHVEE KLKAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQLE SLQEIKISLEEQLKKETAAKATVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADS LERIRAILNDTKLTDINQLPET

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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