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Report for CCDS45867.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45867.1 Public Homo sapiens 18 MRO 24 110 108 CCDS HistoryNCBI Gene:83876Re-query CCDS DB by CCDS ID:45867.1Re-query CCDS DB by GeneID:83876See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45867.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000431965.6 ENSP00000392614.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000431965.6Link to Ensembl Protein Viewer:ENSP00000392614.1Re-query CCDS DB by Nucleotide ID:ENST00000431965Re-query CCDS DB by Protein ID:ENSP00000392614
Original member Current member NCBI NM_001127175.3 NP_001120647.1 Accepted alive Link to Nucleotide Sequence:NM_001127175.3Link to Protein Sequence:NP_001120647.1Re-query CCDS DB by Nucleotide ID:NM_001127175Re-query CCDS DB by Protein ID:NP_001120647Link to BLAST:NP_001120647.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001120647.1 210 Q9BYG7-2 210 100% 0 0

Chromosomal Locations for CCDS 45867.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 50799337 50799390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 50800036 50800143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 50805154 50805336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 50806704 50806850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 50819581 50819702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 50819897 50819915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (633 nt):
ATGGCGTGGGGAAGCAAAGGAATTCAGGGCTGGGAAAATTTAGCCGAGTCATCACATTTGGCTACTACCC
GGGAAAGCAGCCCTCCCGAGTCAGGAACGGGCTCCGGTTCATCACGTGGCAGCCGCCTGCAGGAGCCGCA
GGTCTCTTGGAAACTGAGGTTCCAGAAGCGGGAGCCTCTGAAGAATGTGTTTTTCATCTTGGCAGAAAGA
GCTCGGGACCCCAGTGCTAAAAAGCGTCACATGGCAATGAGAAACTTGGGAACCATGGCCTATGAAGCCC
CTGACAAGGTGAGAAAGTATAAGAAAATTGTCCTCGACCTGCTGGTGTATGGACTGTATGACCCTGTGAA
TTTGGAAGTCATCCATGAGAGTATGAAGACTCTGACCGTCGTTCTGGGCAAGATCCAGGGGAAAGGTTTG
GGTTCCTTCTTCATAGATATCACCCTTCAGACCAGGACTTTATTAGATGACGCTTGCAAAACAACATTTC
AAGCCTGTTCTCCATATCTGAAACTAAAGGAGGAATACAGCTTCCAGAGTGAAGAAGATCAAAGGAACAC
TAAGCTCTACCAGCAGCTGAGCCACTATCATCCAGAGATCCTGCAGTTCTTCTACGCAAATAAAATTCTG
TAA

Translation (210 aa):
MAWGSKGIQGWENLAESSHLATTRESSPPESGTGSGSSRGSRLQEPQVSWKLRFQKREPLKNVFFILAER
ARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGL
GSFFIDITLQTRTLLDDACKTTFQACSPYLKLKEEYSFQSEEDQRNTKLYQQLSHYHPEILQFFYANKIL


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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