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Report for CCDS47712.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47712.1 Public Homo sapiens 7 TMEM209 24 110 108 CCDS HistoryNCBI Gene:84928Re-query CCDS DB by CCDS ID:47712.1Re-query CCDS DB by GeneID:84928See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47712.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000397622.7 ENSP00000380747.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000397622.7Link to Ensembl Protein Viewer:ENSP00000380747.2Re-query CCDS DB by Nucleotide ID:ENST00000397622Re-query CCDS DB by Protein ID:ENSP00000380747
Original member Current member NCBI NM_032842.4 NP_116231.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032842.4Link to Protein Sequence:NP_116231.2Re-query CCDS DB by Nucleotide ID:NM_032842Re-query CCDS DB by Protein ID:NP_116231Link to BLAST:NP_116231.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116231.2 561 Q96SK2-1 561 100% 0 0

Chromosomal Locations for CCDS 47712.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 130166451 130166505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130170400 130170473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130173632 130173729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130173825 130173939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130175512 130175609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130178402 130178527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130181623 130181719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130184184 130184255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130185192 130185367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130192622 130192823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130201850 130202091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130202532 130202663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130203788 130203846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130203974 130204110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130205373 130205375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1686 nt):
ATGATGCAGGGGGAGGCACACCCTAGTGCTTCCCTTATTGACAGAACCATCAAGATGAGAAAAGAAACAG
AGGCTAGGAAAGTGGTCTTAGCCTGGGGACTCCTAAATGTATCTATGGCTGGAATGATATATACTGAAAT
GACTGGAAAATTGATTAGTTCATACTACAATGTGACATACTGGCCCCTCTGGTATATTGAGCTTGCCCTT
GCATCTCTCTTCAGCCTTAATGCCTTATTTGATTTTTGGAGATATTTCAAATATACTGTGGCACCAACAA
GTCTGGTTGTTAGTCCTGGACAGCAAACACTTTTAGGGTTGAAAACAGCTGTTGTACAGACTACGCCTCC
ACATGATCTGGCAGCAACCCAAATCCCTCCCGCTCCACCTTCCCCTTCAATTCAGGGTCAGAGTGTGTTG
AGTTATAGCCCTTCTCGTTCGCCCAGTACCAGTCCCAAGTTCACCACCAGCTGTATGACTGGTTACAGCC
CTCAGCTGCAAGGTCTGTCCTCAGGTGGCAGTGGTTCTTATAGCCCTGGAGTGACCTACTCGCCCGTCAG
TGGTTATAATAAGTTGGCGAGCTTTAGCCCCTCTCCTCCTTCTCCGTACCCTACCACTGTTGGACCAGTG
GAGAGCAGTGGATTGAGATCTCGCTACCGTTCTTCACCTACCGTCTACAACTCACCTACTGACAAAGAAG
ACTACATGACCGACCTACGAACTTTGGATACTTTTCTCAGAAGTGAAGAGGAGAAACAGCATAGGGTTAA
GCTGGGGAGCCCAGATTCTACCTCTCCTTCCAGCAGTCCTACTTTCTGGAACTATAGTCGTTCTATGGGG
GATTATGCACAAACTTTAAAGAAGTTTCAGTATCAGCTTGCCTGTAGGTCTCAGGCCCCATGTGCTAACA
AAGATGAAGCCGATCTCAGCTCTAAACAAGCCGCAGAAGAGGTCTGGGCAAGAGTGGCTATGAATAGACA
ACTTCTTGATCATATGGATTCATGGACAGCTAAATTTAGAAATTGGATCAATGAGACAATATTAGTGCCA
CTTGTTCAAGAGATTGAGTCTGTCAGCACACAGATGAGACGAATGGGTTGTCCAGAGCTACAGATAGGAG
AGGCTAGTATTACTAGCTTGAAACAAGCTGCCCTGGTTAAAGCGCCTCTCATTCCGACTTTGAACACAAT
CGTTCAGTATCTAGACCTTACTCCAAATCAGGAATACTTGTTTGAAAGGATCAAAGAACTATCTCAGGGA
GGTTGTATGAGCTCATTTCGATGGAACAGAGGTGGCGACTTCAAAGGACGAAAGTGGGATACAGACCTGC
CCACCGATTCTGCTATCATCATGCATGTATTTTGCACCTACCTTGATTCCAGATTACCTCCACATCCGAA
GTATCCCGACGGAAAAACTTTTACTTCTCAGCACTTTGTTCAGACACCAAATAAACCAGATGTTACAAAT
GAGAATGTTTTTTGCATTTATCAGAGTGCTATCAACCCTCCCCATTATGAGCTCATCTACCAGCGTCATG
TATACAACCTGCCAAAGGGCAGAAATAATATGTTTCATACATTGTTGATGTTTCTCTACATCATAAAGAC
CAAAGAGTCAGGAATGCTTGGGAGAGTTAATCTTGGTCTATCTGGTGTGAATATATTGTGGATCTTTGGC
GAGTAG

Translation (561 aa):
MMQGEAHPSASLIDRTIKMRKETEARKVVLAWGLLNVSMAGMIYTEMTGKLISSYYNVTYWPLWYIELAL
ASLFSLNALFDFWRYFKYTVAPTSLVVSPGQQTLLGLKTAVVQTTPPHDLAATQIPPAPPSPSIQGQSVL
SYSPSRSPSTSPKFTTSCMTGYSPQLQGLSSGGSGSYSPGVTYSPVSGYNKLASFSPSPPSPYPTTVGPV
ESSGLRSRYRSSPTVYNSPTDKEDYMTDLRTLDTFLRSEEEKQHRVKLGSPDSTSPSSSPTFWNYSRSMG
DYAQTLKKFQYQLACRSQAPCANKDEADLSSKQAAEEVWARVAMNRQLLDHMDSWTAKFRNWINETILVP
LVQEIESVSTQMRRMGCPELQIGEASITSLKQAALVKAPLIPTLNTIVQYLDLTPNQEYLFERIKELSQG
GCMSSFRWNRGGDFKGRKWDTDLPTDSAIIMHVFCTYLDSRLPPHPKYPDGKTFTSQHFVQTPNKPDVTN
ENVFCIYQSAINPPHYELIYQRHVYNLPKGRNNMFHTLLMFLYIIKTKESGMLGRVNLGLSGVNILWIFG
E


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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