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Report for CCDS4897.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4897.1 Public Homo sapiens 6 DLK2 24 110 108 CCDS HistoryNCBI Gene:65989Re-query CCDS DB by CCDS ID:4897.1Re-query CCDS DB by GeneID:65989See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4897.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357338.3 ENSP00000349893.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000357338.3Link to Ensembl Protein Viewer:ENSP00000349893.3Re-query CCDS DB by Nucleotide ID:ENST00000357338Re-query CCDS DB by Protein ID:ENSP00000349893
Original member Current member EBI ENST00000372488.8 ENSP00000361566.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000372488.8Link to Ensembl Protein Viewer:ENSP00000361566.3Re-query CCDS DB by Nucleotide ID:ENST00000372488Re-query CCDS DB by Protein ID:ENSP00000361566
Original member Current member NCBI NM_023932.4 NP_076421.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_023932.4Link to Protein Sequence:NP_076421.2Re-query CCDS DB by Nucleotide ID:NM_023932Re-query CCDS DB by Protein ID:NP_076421Link to BLAST:NP_076421.2
Original member Current member NCBI NM_206539.2 NP_996262.1 Accepted alive Link to Nucleotide Sequence:NM_206539.2Link to Protein Sequence:NP_996262.1Re-query CCDS DB by Nucleotide ID:NM_206539Re-query CCDS DB by Protein ID:NP_996262Link to BLAST:NP_996262.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_076421.2 383 Q6UY11-1 383 100% 0 0
NP_996262.1 383 Q6UY11-1 383 100% 0 0

Chromosomal Locations for CCDS 4897.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 43450539 43451274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43451940 43452084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43453005 43453135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43454411 43454474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43454750 43454825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1152 nt):
ATGCCCAGCGGCTGCCGCTGCCTGCATCTCGTGTGCCTGTTGTGCATTCTGGGGGCTCCCGGTCAGCCTG
TCCGAGCCGATGACTGCAGCTCCCACTGTGACCTGGCCCACGGCTGCTGTGCACCTGACGGCTCCTGCAG
GTGTGACCCGGGCTGGGAGGGGCTGCACTGTGAGCGCTGTGTGAGGATGCCTGGCTGCCAGCACGGTACC
TGCCACCAGCCATGGCAGTGCATCTGCCACAGTGGCTGGGCAGGCAAGTTCTGTGACAAAGATGAACATA
TCTGTACCACGCAGTCCCCCTGCCAGAATGGAGGCCAGTGCATGTATGACGGGGGCGGTGAGTACCATTG
TGTGTGCTTACCAGGCTTCCATGGGCGTGACTGCGAGCGCAAGGCTGGACCCTGTGAACAGGCAGGCTCC
CCATGCCGCAATGGCGGGCAGTGCCAGGACGACCAGGGCTTTGCTCTCAACTTCACGTGCCGCTGCTTGG
TGGGCTTTGTGGGTGCCCGCTGTGAGGTAAATGTGGATGACTGCCTGATGCGGCCTTGTGCTAACGGTGC
CACCTGCCTTGACGGCATAAACCGCTTCTCCTGCCTCTGTCCTGAGGGCTTTGCTGGACGCTTCTGCACC
ATCAACCTGGATGACTGTGCCAGCCGCCCATGCCAGAGAGGGGCCCGCTGTCGGGACCGTGTCCACGACT
TCGACTGCCTCTGCCCCAGTGGCTATGGTGGCAAGACCTGTGAGCTTGTCTTACCTGTCCCAGACCCCCC
AACCACAGTGGACACCCCTCTAGGGCCCACCTCAGCTGTAGTGGTACCTGCCACGGGGCCAGCCCCCCAC
AGCGCAGGGGCTGGTCTGCTGCGGATCTCAGTGAAGGAGGTGGTGCGGAGGCAAGAGGCTGGGCTAGGTG
AGCCTAGCTTGGTGGCCCTGGTGGTGTTTGGGGCCCTCACTGCTGCCCTGGTTCTGGCTACTGTGTTGCT
GACCCTGAGGGCCTGGCGCCGGGGTGTCTGCCCCCCTGGACCCTGTTGCTACCCTGCCCCACACTATGCT
CCAGCGTGCCAGGACCAGGAGTGTCAGGTTAGCATGCTGCCAGCAGGGCTCCCCCTGCCACGTGACTTGC
CCCCTGAGCCTGGAAAGACCACAGCACTGTGA

Translation (383 aa):
MPSGCRCLHLVCLLCILGAPGQPVRADDCSSHCDLAHGCCAPDGSCRCDPGWEGLHCERCVRMPGCQHGT
CHQPWQCICHSGWAGKFCDKDEHICTTQSPCQNGGQCMYDGGGEYHCVCLPGFHGRDCERKAGPCEQAGS
PCRNGGQCQDDQGFALNFTCRCLVGFVGARCEVNVDDCLMRPCANGATCLDGINRFSCLCPEGFAGRFCT
INLDDCASRPCQRGARCRDRVHDFDCLCPSGYGGKTCELVLPVPDPPTTVDTPLGPTSAVVVPATGPAPH
SAGAGLLRISVKEVVRRQEAGLGEPSLVALVVFGALTAALVLATVLLTLRAWRRGVCPPGPCCYPAPHYA
PACQDQECQVSMLPAGLPLPRDLPPEPGKTTAL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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