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Report for CCDS53773.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53773.1 Public Homo sapiens 12 IPO8 24 110 108 CCDS HistoryNCBI Gene:10526Re-query CCDS DB by CCDS ID:53773.1Re-query CCDS DB by GeneID:10526See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53773.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000544829.5 ENSP00000444520.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000544829.5Link to Ensembl Protein Viewer:ENSP00000444520.1Re-query CCDS DB by Nucleotide ID:ENST00000544829Re-query CCDS DB by Protein ID:ENSP00000444520
Original member Current member NCBI NM_001190995.2 NP_001177924.1 Accepted alive Link to Nucleotide Sequence:NM_001190995.2Link to Protein Sequence:NP_001177924.1Re-query CCDS DB by Nucleotide ID:NM_001190995Re-query CCDS DB by Protein ID:NP_001177924Link to BLAST:NP_001177924.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001177924.1 832 O15397-2 832 100% 0 0

Chromosomal Locations for CCDS 53773.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 30630860 30630957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30631895 30632011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30634083 30634286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30636982 30637187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30639515 30639735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30649137 30649232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30652192 30652289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30652967 30653092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30656684 30656750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30661141 30661266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30662327 30662487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30663489 30663654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30665220 30665309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30665729 30665845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30666175 30666251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30669183 30669282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30670962 30671096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30673990 30674074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30674659 30674753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30676498 30676587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30676896 30676919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2499 nt):
ATGGAAAGTTTGACCCTCAAAGGGTATGCATTGCCTCTTCAGCTAGTGAATAACCAAACCATGACAACAT
GGATGGAGATCTTCCGAACTATTATCGACAGGACCGTTCCTCCTGAGACTCTGCACATTGATGAGGATGA
TAGACCAGAACTGGTATGGTGGAAGTGTAAGAAGTGGGCACTGCATATTGTAGCTCGGCTCTTTGAACGA
TATGGAAGCCCAGGAAATGTCACAAAAGAATACTTTGAATTTTCTGAATTCTTTTTGAAAACCTATGCAG
TGGGCATTCAGCAGGTGCTACTAAAAATTTTAGATCAATATAGACAGAAAGAATATGTAGCTCCCCGTGT
TCTTCAGCAAGCATTCAACTATCTCAACCAAGGGGTGGTTCATTCTATAACCTGGAAGCAGATGAAGCCA
CACATACAGAATATCTCTGAAGATGTGATTTTTTCTGTGATGTGTTATAAAGATGAGGATGAAGAGCTGT
GGCAAGAAGATCCATATGAGTATATAAGGATGAAATTTGATATTTTTGAAGATTATGCTTCTCCCACCAC
AGCAGCCCAGACTCTCTTATATACTGCTGCAAAGAAAAGAAAAGAGGTGTTGCCAAAAATGATGGCATTC
TGTTATCAAATCCTGACAGACCCGAACTTTGACCCTAGGAAGAAAGATGGAGCCCTGCATGTGATTGGTT
CCCTAGCTGAGATTTTACTGAAGAAGAGTTTATTCAAGGACCAAATGGAGCTGTTTCTACAAAATCATGT
ATTTCCATTATTATTGTCTAACCTGGGATATCTTCGAGCTAGATCTTGCTGGGTACTTCATGCATTTAGT
TCTTTGAAGTTCCATAATGAGCTCAATCTAAGAAATGCCGTTGAATTAGCGAAGAAGAGCCTGATTGAAG
ATAAAGAGATGCCTGTCAAAGTTGAAGCTGCCCTTGCTCTTCAGTCTTTAATTTCTAACCAGATACAAGC
TAAGGAATATATGAAGCCACATGTGAGGCCTATTATGCAGGAACTGTTGCACATTGTTAGAGAGACAGAA
AATGATGATGTTACTAATGTCATCCAGAAGATGATATGTGAATACAGTCAAGAGGTAGCCTCAATTGCTG
TTGATATGACCCAACACTTGGCTGAGATATTTGGCAAAGTTCTTCAAAGTGATGAATATGAAGAAGTTGA
AGACAAAACAGTAATGGCTATGGGAATTTTACATACCATTGATACTATCTTAACAGTTGTAGAAGATCAT
AAAGAGATTACCCAGCAGTTAGAGAATATCTGTCTACGGATCATTGATCTTGTTCTGCAGAAACATGTAA
TTGAATTCTATGAAGAAATTCTTTCCCTGGCATACAGTTTAACCTGCCACAGTATTTCCCCTCAAATGTG
GCAGCTTCTAGGTATACTATATGAAGTGTTTCAGCAGGATTGCTTTGAATACTTTACAGACATGATGCCT
CTCCTGCATAATTATGTGACAATAGATACAGATACCTTACTATCAAATGCAAAACATTTAGAAATTCTTT
TTACAATGTGTAGGAAGGTACTATGTGGAGATGCAGGAGAAGATGCAGAGTGTCATGCAGCTAAACTTCT
GGAAGTCATCATTCTTCAGTGCAAAGGAAGGGGAATTGATCAGTGCATTCCACTCTTCGTTCAACTTGTT
TTGGAGAGATTAACTCGAGGGGTCAAAACTAGTGAGCTTCGTACTATGTGTCTTCAGGTTGCAATTGCTG
CCTTGTACTACAACCCTGATTTGCTGCTACATACTTTAGAACGAATTCAGTTGCCTCACAACCCTGGACC
TATCACTGTACAGTTTATAAATCAATGGATGAATGATACAGATTGTTTTCTTGGGCATCATGACCGGAAG
ATGTGTATAATAGGACTGAGTATCCTTTTGGAATTGCAAAATCGACCTCCTGCAGTAGATGCTGTGGTGG
GACAGATTGTTCCCTCAATTCTTTTCCTTTTCCTTGGCCTAAAGCAGGTCTGTGCTACTAGACAACTGGT
AAACCGGGAAGATCGTTCAAAAGCAGAGAAAGCTGATATGGAAGAAAATGAGGAGATTTCAAGTGATGAA
GAGGAGACAAATGTAACTGCTCAAGCAATGCAGTCAAATAATGGAAGAGGTGAAGATGAGGAGGAGGAAG
ATGATGACTGGGATGAAGAAGTATTGGAAGAAACCGCGCTTGAGGGGTTCAGTACTCCACTTGACCTTGA
CAATAGTGTGGATGAATATCAGTTTTTTACACAAGCTCTGATAACTGTGCAGAGTCGAGATGCAGCCTGG
TACCAGCTGCTGATGGCACCACTCAGCGAGGATCAGAGGACAGCACTGCAGGAGGTGTACACACTGGCAG
AGCACCGACGGACGGTGGCAGAGGCAAAGAAGAAGATTGAACAACAGGGAGGCTTCACCTTTGAAAACAA
AGGAGTCCTCTCCGCATTTAATTTTGGGACTGTGCCCAGCAACAACTGA

Translation (832 aa):
MESLTLKGYALPLQLVNNQTMTTWMEIFRTIIDRTVPPETLHIDEDDRPELVWWKCKKWALHIVARLFER
YGSPGNVTKEYFEFSEFFLKTYAVGIQQVLLKILDQYRQKEYVAPRVLQQAFNYLNQGVVHSITWKQMKP
HIQNISEDVIFSVMCYKDEDEELWQEDPYEYIRMKFDIFEDYASPTTAAQTLLYTAAKKRKEVLPKMMAF
CYQILTDPNFDPRKKDGALHVIGSLAEILLKKSLFKDQMELFLQNHVFPLLLSNLGYLRARSCWVLHAFS
SLKFHNELNLRNAVELAKKSLIEDKEMPVKVEAALALQSLISNQIQAKEYMKPHVRPIMQELLHIVRETE
NDDVTNVIQKMICEYSQEVASIAVDMTQHLAEIFGKVLQSDEYEEVEDKTVMAMGILHTIDTILTVVEDH
KEITQQLENICLRIIDLVLQKHVIEFYEEILSLAYSLTCHSISPQMWQLLGILYEVFQQDCFEYFTDMMP
LLHNYVTIDTDTLLSNAKHLEILFTMCRKVLCGDAGEDAECHAAKLLEVIILQCKGRGIDQCIPLFVQLV
LERLTRGVKTSELRTMCLQVAIAALYYNPDLLLHTLERIQLPHNPGPITVQFINQWMNDTDCFLGHHDRK
MCIIGLSILLELQNRPPAVDAVVGQIVPSILFLFLGLKQVCATRQLVNREDRSKAEKADMEENEEISSDE
EETNVTAQAMQSNNGRGEDEEEEDDDWDEEVLEETALEGFSTPLDLDNSVDEYQFFTQALITVQSRDAAW
YQLLMAPLSEDQRTALQEVYTLAEHRRTVAEAKKKIEQQGGFTFENKGVLSAFNFGTVPSNN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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