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Report for CCDS55724.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55724.1 Public Homo sapiens 10 SEMA4G 24 110 108 CCDS HistoryNCBI Gene:57715Re-query CCDS DB by CCDS ID:55724.1Re-query CCDS DB by GeneID:57715See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55724.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000517724.5 ENSP00000430175.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000517724.5Link to Ensembl Protein Viewer:ENSP00000430175.1Re-query CCDS DB by Nucleotide ID:ENST00000517724Re-query CCDS DB by Protein ID:ENSP00000430175
Original member Current member NCBI NM_001203244.1 NP_001190173.1 Accepted alive Link to Nucleotide Sequence:NM_001203244.1Link to Protein Sequence:NP_001190173.1Re-query CCDS DB by Nucleotide ID:NM_001203244Re-query CCDS DB by Protein ID:NP_001190173Link to BLAST:NP_001190173.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001190173.1 702 Q9NTN9-3 702 100% 0 0

Chromosomal Locations for CCDS 55724.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 100972913 100973036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100973129 100973277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100973547 100973609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100977632 100977730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100978295 100978388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100978527 100978640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100978849 100979018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100979102 100979271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100979848 100979992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100980122 100980344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100980578 100980693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100980822 100980997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100981168 100981229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100984490 100984893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2109 nt):
ATGTGGGGGAGGCTCTGGCCCCTCCTCCTCAGCATCCTCACAGCAACTGCAGTCCCAGGACCCTCACTGC
GGAGACCGTCTAGAGAACTAGATGCCACCCCTCGGATGACCATACCCTATGAAGAGCTCTCTGGGACCCG
GCACTTCAAGGGCCAAGCCCAGAACTACTCAACACTGCTGCTGGAGGAGGCCTCAGCAAGGCTGCTGGTG
GGAGCCCGAGGTGCCCTGTTCTCTCTCAGTGCCAACGACATAGGAGATGGGGCTCACAAAGAGATCCACT
GGGAAGCCTCCCCAGAGATGCAAAGCAAATGTCATCAAAAAGGGAAAAACAACCAGACGGAGTGCTTTAA
CCATGTGCGGTTCCTGCAGCGGCTCAATTCTACCCACCTCTATGCATGTGGGACTCACGCCTTCCAGCCC
CTCTGTGCAGCCATTGATGCTGAGGCCTTCACCTTGCCAACCAGCTTCGAGGAGGGGAAGGAGAAGTGTC
CTTATGACCCAGCCCGTGGCTTCACAGGCCTCATCATTGATGGAGGCCTCTACACAGCCACTAGGTATGA
ATTCCGGAGCATTCCTGACATCCGCCGGAGCCGCCACCCACACTCCCTGAGAACTGAGGAGACACCAATG
CATTGGCTCAATGATGCGGAGTTTGTGTTCTCCGTCCTCGTGCGGGAGAGCAAGGCCAGTGCAGTGGGTG
ATGATGACAAGGTGTACTACTTCTTCACGGAGCGTGCCACTGAGGAGGGCTCTGGCAGCTTCACTCAGAG
CCGCAGCAGTCACCGTGTGGCCCGTGTGGCTCGTGTCTGCAAGGGAGACCTGGGAGGGAAGAAGATCCTG
CAGAAGAAGTGGACTTCCTTCCTGAAAGCCCGTCTCATCTGCCACATTCCACTGTATGAGACACTGCGTG
GGGTCTGCAGCCTGGATGCTGAAACCTCAAGCCGTACACACTTCTATGCAGCCTTCACGCTGAGCACACA
GTGGAAGACCCTGGAGGCCTCAGCCATCTGCCGCTATGACCTGGCAGAGATCCAGGCTGTCTTTGCAGGA
CCCTATATGGAATACCAGGATGGTTCCCGGCGCTGGGGTCGCTATGAGGGTGGGGTGCCTGAGCCCCGGC
CTGGCTCGTGTATCACAGATTCATTGCGCAGCCAAGGCTACAATTCATCCCAAGACTTGCCATCCCTGGT
CCTGGACTTTGTAAAGTTGCACCCACTGATGGCTCGGCCCGTTGTGCCCACACGTGGACGGCCCCTGCTG
CTCAAGCGCAACATACGCTACACACACCTTACAGGGACACCTGTCACCACGCCTGCTGGACCTACCTATG
ACCTGCTCTTTCTGGGCACAGCTGATGGCTGGATCCACAAGGCCGTAGTCCTGGGCTCTGGGATGCACAT
TATTGAAGAGACACAAGTGTTCAGGGAGTCCCAGTCTGTGGAAAATCTAGTCATCTCTCTATTGCAGCAC
AGCCTCTATGTGGGGGCTCCTAGCGGAGTCATCCAGCTACCACTCTCCAGCTGCTCCCGCTACCGATCCT
GCTATGACTGCATCTTGGCCCGAGACCCCTACTGTGGCTGGGACCCTGGCACCCATGCCTGCGCAGCAGC
CACCACCATAGCCAACAGGTCCCAGGGAAGCAGGACAGCACTGATACAGGACATAGAGAGAGGAAATCGA
GGCTGTGAGAGCAGCAGGGATACAGGCAGGGCTCTGCAGGTCCATATGGGCTCAATGTCACCACCCTCTG
CATGGCCCTGTGTGCTGGATGGTCCTGAAACCAGACAAGACCTCTGCCAGCCACCTAAGCCCTGCGTACA
TTCACATGCACACATGGAAGAATGTTTATCGGCTGGGCTGCAGTGCCCCCACCCTCACCTTCTCCTGGTG
CATTCTTGTTTCATCCCTGCTTCTGGACTTGGGGTACCCTCCCAATTGCCACATCCTATCTGGTCCTCTT
CCCCAGCCCCATGTGGTGACCTCTTTGTCAAGAGCTTGGGAACGGGCCAGCCTGGGGAGGTAAGACTGCA
TCACTCCCCTCCTCTCCCTTCCTGTGTGGCCCTTGTGAATCAGCCTCCCCACTCTCCTTGGTCATTCTCA
AGAGTATGA

Translation (702 aa):
MWGRLWPLLLSILTATAVPGPSLRRPSRELDATPRMTIPYEELSGTRHFKGQAQNYSTLLLEEASARLLV
GARGALFSLSANDIGDGAHKEIHWEASPEMQSKCHQKGKNNQTECFNHVRFLQRLNSTHLYACGTHAFQP
LCAAIDAEAFTLPTSFEEGKEKCPYDPARGFTGLIIDGGLYTATRYEFRSIPDIRRSRHPHSLRTEETPM
HWLNDAEFVFSVLVRESKASAVGDDDKVYYFFTERATEEGSGSFTQSRSSHRVARVARVCKGDLGGKKIL
QKKWTSFLKARLICHIPLYETLRGVCSLDAETSSRTHFYAAFTLSTQWKTLEASAICRYDLAEIQAVFAG
PYMEYQDGSRRWGRYEGGVPEPRPGSCITDSLRSQGYNSSQDLPSLVLDFVKLHPLMARPVVPTRGRPLL
LKRNIRYTHLTGTPVTTPAGPTYDLLFLGTADGWIHKAVVLGSGMHIIEETQVFRESQSVENLVISLLQH
SLYVGAPSGVIQLPLSSCSRYRSCYDCILARDPYCGWDPGTHACAAATTIANRSQGSRTALIQDIERGNR
GCESSRDTGRALQVHMGSMSPPSAWPCVLDGPETRQDLCQPPKPCVHSHAHMEECLSAGLQCPHPHLLLV
HSCFIPASGLGVPSQLPHPIWSSSPAPCGDLFVKSLGTGQPGEVRLHHSPPLPSCVALVNQPPHSPWSFS
RV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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