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Report for CCDS5698.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5698.1 Public Homo sapiens 7 FBXO24 24 110 108 CCDS HistoryNCBI Gene:26261Re-query CCDS DB by CCDS ID:5698.1Re-query CCDS DB by GeneID:26261See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5698.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000241071.11 ENSP00000241071.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000241071.11Link to Ensembl Protein Viewer:ENSP00000241071.6Re-query CCDS DB by Nucleotide ID:ENST00000241071Re-query CCDS DB by Protein ID:ENSP00000241071
Original member Current member NCBI NM_033506.3 NP_277041.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033506.3Link to Protein Sequence:NP_277041.1Re-query CCDS DB by Nucleotide ID:NM_033506Re-query CCDS DB by Protein ID:NP_277041Link to BLAST:NP_277041.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_277041.1 580 O75426-1 580 100% 0 0

Chromosomal Locations for CCDS 5698.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 100586626 100586664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100589977 100590075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100590174 100590357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100591667 100591902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100592783 100593017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100594383 100594541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100595102 100595223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100595575 100595706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100600031 100600201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100600534 100600899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1743 nt):
ATGGGCGAGAAGGCGGTCCCTTTGCTAAGGAGGAGGCGGGTGAAGAGAAGCTGCCCTTCTTGTGGCTCGG
AGCTTGGGGTTGAAGAGAAGAGGGGGAAAGGAAATCCGATTTCCATCCAGTTGTTCCCCCCAGAGCTGGT
GGAGCATATCATCTCATTCCTCCCAGTCAGAGACCTTGTTGCCCTCGGCCAGACCTGCCGCTACTTCCAC
GAAGTGTGCGATGGGGAAGGCGTGTGGAGACGCATCTGTCGCAGACTCAGTCCGCGCCTCCAAGATCAGG
GTTCTGGAGTCCGGCCCTGGAAGAGAGCTGCCATTCTGAACTACACGAAGGGCCTGTATTTCCAGGCATT
TGGAGGCCGCCGCCGATGTCTCAGCAAGAGCGTGGCCCCCTTGCTAGCCCACGGCTACCGCCGCTTCTTG
CCCACCAAGGATCACGTCTTCATTCTTGACTACGTGGGGACCCTCTTCTTCCTCAAAAATGCCCTGGTCT
CCACCCTCGGCCAGATGCAGTGGAAGCGGGCCTGTCGCTATGTTGTGTTGTGTCGTGGAGCCAAGGATTT
TGCCTCGGACCCAAGGTGTGACACAGTTTACCGTAAATACCTCTACGTCTTGGCCACTCGGGAGCCGCAG
GAAGTGGTGGGTACCACCAGCAGCCGGGCCTGTGACTGTGTTGAGGTCTATCTGCAGTCTAGTGGGCAGC
GGGTCTTCAAGATGACATTCCACCACTCAATGACCTTCAAGCAGATCGTGCTGGTTGGTCAGGAGACCCA
GCGGGCTCTACTGCTCCTCACAGAGGAAGGAAAGATCTACTCTTTGGTAGTGAATGAGACCCAGCTTGAC
CAGCCACGCTCCTACACGGTTCAGCTGGCCCTGAGGAAGGTGTCCCACTACCTGCCTCACCTGCGCGTGG
CCTGCATGACTTCCAACCAGAGCAGCACCCTCTACGTCACAGACCAGGGGGGAGTGTATTTTGAGGTGCA
TACCCCAGGGGTGTATCGCGATCTCTTTGGGACCCTTCAAGCCTTTGACCCCCTGGACCAGCAGATGCCG
CTTGCTCTCTCACTGCCTGCCAAGATCCTATTCTGTGCTCTTGGCTACAACCACCTTGGCCTGGTGGATG
AATTTGGCCGAATCTTCATGCAAGGAAATAACAGATACGGGCAGCTAGGAACAGGGGACAAAATGGACCG
AGGGGAACCCACACAGGTTTGTTACCTGCAGCGGCCCATCACCCTGTGGTGCGGCCTCAACCACTCCCTG
GTGCTGAGCCAGAGCTCAGAGTTCAGCAAGGAGCTGCTGGGCTGCGGCTGTGGGGCTGGGGGCCGCCTCC
CAGGCTGGCCCAAGGGGAGTGCCTCCTTCGTCAAGCTCCAAGTCAAGGTCCCTCTGTGTGCCTGTGCCCT
CTGTGCCACCAGGGAGTGCCTATACATCCTGTCCAGCCACGACATTGAGCAGCACGCCCCCTATCGCCAC
CTGCCAGCCAGCAGGGTGGTGGGGACTCCTGAGCCCAGCCTGGGGGCCAGAGCACCCCAGGACCCCGGGG
GGATGGCCCAGGCCTGCGAGGAGTACCTCAGCCAGATCCACAGTTGCCAAACGTTGCAGGACCGCACGGA
GAAGATGAAGGAGATCGTAGGGTGGATGCCCCTGATGGCCGCACAGAAGGACTTCTTCTGGGAGGCCCTG
GACATGCTGCAGAGGGCTGAAGGAGGCGGGGGTGGTGTAGGGCCCCCAGCCCCTGAGACCTAA

Translation (580 aa):
MGEKAVPLLRRRRVKRSCPSCGSELGVEEKRGKGNPISIQLFPPELVEHIISFLPVRDLVALGQTCRYFH
EVCDGEGVWRRICRRLSPRLQDQGSGVRPWKRAAILNYTKGLYFQAFGGRRRCLSKSVAPLLAHGYRRFL
PTKDHVFILDYVGTLFFLKNALVSTLGQMQWKRACRYVVLCRGAKDFASDPRCDTVYRKYLYVLATREPQ
EVVGTTSSRACDCVEVYLQSSGQRVFKMTFHHSMTFKQIVLVGQETQRALLLLTEEGKIYSLVVNETQLD
QPRSYTVQLALRKVSHYLPHLRVACMTSNQSSTLYVTDQGGVYFEVHTPGVYRDLFGTLQAFDPLDQQMP
LALSLPAKILFCALGYNHLGLVDEFGRIFMQGNNRYGQLGTGDKMDRGEPTQVCYLQRPITLWCGLNHSL
VLSQSSEFSKELLGCGCGAGGRLPGWPKGSASFVKLQVKVPLCACALCATRECLYILSSHDIEQHAPYRH
LPASRVVGTPEPSLGARAPQDPGGMAQACEEYLSQIHSCQTLQDRTEKMKEIVGWMPLMAAQKDFFWEAL
DMLQRAEGGGGGVGPPAPET


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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