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Report for CCDS58224.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58224.1 Public Homo sapiens 12 DDX11 24 110 108 CCDS HistoryNCBI Gene:1663Re-query CCDS DB by CCDS ID:58224.1Re-query CCDS DB by GeneID:1663See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58224.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000228264.10 ENSP00000228264.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000228264.10Link to Ensembl Protein Viewer:ENSP00000228264.6Re-query CCDS DB by Nucleotide ID:ENST00000228264Re-query CCDS DB by Protein ID:ENSP00000228264
Original member Current member NCBI NM_001257145.2 NP_001244074.1 Accepted alive Link to Nucleotide Sequence:NM_001257145.2Link to Protein Sequence:NP_001244074.1Re-query CCDS DB by Nucleotide ID:NM_001257145Re-query CCDS DB by Protein ID:NP_001244074Link to BLAST:NP_001244074.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001244074.1 880 Q96FC9-3 880 100% 0 0

Chromosomal Locations for CCDS 58224.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 31078472 31078537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31083813 31084061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31084583 31084669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31084969 31085126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31087938 31087983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31089044 31089151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31089403 31089490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31089886 31090094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31091719 31091871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31092846 31092892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31093245 31093324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31094590 31094634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31094755 31094822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31096341 31096379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31096637 31096745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31096859 31096990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31097885 31097997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31100635 31100707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31101027 31101130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31101833 31101982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31102243 31102311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31102427 31102527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31102936 31103020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31103317 31103395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31103577 31103731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31103807 31103836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2643 nt):
ATGGCAGAGCTGTACCGGGTTTTGGAGGCTGGCAAGATTGGGATATTTGAGAGTCCAACTGGCACTGGGA
AGTCCTTAAGTCTTATTTGTGGGGCCCTCTCTTGGCTCCGTGACTTTGAACAGAAGAAGCGTGAAGAAGA
GGCACGACTCCTTGAAACTGGAACTGGCCCCTTACATGATGAGAAAGATGAATCCCTGTGTCTGTCTTCT
TCCTGCGAAGGGGCTGCAGGCACCCCGAGGCCTGCTGGAGAACCGGCCTGGGTTACTCAGTTTGTGCAGA
AGAAAGAAGAGAGGGACCTGGTGGACCGACTAAAGGCGGAGCAGGCCAGGAGGAAGCAGCGAGAAGAACG
CCTGCAGCAGCTGCAGCACAGGGTGCAGCTCAAGTATGCAGCCAAGCGCCTGAGGCAGGAAGAAGAAGAA
AGAGAGAATCTCCTCCGCCTCAGCAGGGAGATGCTAGAGACAGGCCCGGAGGCTGAGCGGCTGGAGCAGC
TGGAGTCTGGGGAGGAGGAGCTGGTCCTCGCCGAATACGAGAGTGATGAGGAGAAAAAGGTGGCGAGCAG
AGTGGATGAGGATGAGGATGACCTGGAGGAAGAACACATAACTAAGATTTATTACTGTAGTCGGACACAC
TCCCAGCTGGCCCAGTTTGTGCATGAGGTGAAGAAGAGCCCCTTTGGCAAGGATGTTCGGCTGGTCTCCC
TTGGCTCCCGGCAGAACCTTTGTGTAAATGAAGACGTGAAAAGCCTAGGTTCTGTGCAGCTTATCAACGA
CCGCTGTGTGGACATGCAGAGAAGCAGGCACGAGAAGAAGAAAGGAGCTGAGGAGGAGAAGCCAAAGAGG
AGGAGGCAGGAGAAGCAGGCAGCCTGCCCCTTCTACAACCACGAGCAGATGGGCCTTCTCCGGGATGAGG
CCCTGGCAGAGGTGAAGGACATGGAGCAGCTGCTGGCCCTTGGGAAGGAGGCCCGGGCCTGTCCCTATTA
CGGGAGCCGCCTTGCCATCCCTGCAGCCCAGCTGGTGGTGCTGCCCTATCAGATGCTGCTGCATGCGGCC
ACTCGGCAGGCCGCGGGCATCCGGCTGCAGGACCAGGTGGTGATCATCGACGAGGCGCACAACCTGATCG
ACACCATCACGGGCATGCACAGCGTGGAGGTCAGCGGCTCCCAGCTCTGCCAGGCCCATTCCCAGCTGCT
GCAGTACGTGGAGCGATACGGGAAGCGTTTGAAGGCCAAGAACCTGATGTACCTGAAGCAGATCCTGTAT
TTGCTGGAGAAATTCGTGGCTGTGCTAGGGGGGAACATTAAGCAAAATCCCAATACACAGAGTCTGTCAC
AGACAGGGACGGAGCTGAAGACCATCAACGACTTTCTCTTCCAGAGCCAGATCGACAACATCAACCTGTT
CAAGGTGCAGCGATACTGTGAGAAGAGCATGATCAGCAGAAAGCTCTTTGGATTCACTGAACGGTACGGA
GCAGTGTTCTCATCCCGGGAGCAGCCCAAACTGGCTGGGTTTCAGCAATTCCTGCAGAGCCTGCAGCCCA
GGACGACTGAAGCTCTTGCAGCCCCTGCAGACGAGAGTCAGGCCAGCACCCTGCGACCAGCTTCTCCACT
GATGCACATCCAAGGCTTCCTGGCAGCTCTCACTACGGCCAACCAGGACGGCAGGGTCATCCTGAGCCGC
CAAGGCAGCCTCAGTCAGAGCACCCTGAAGTTTTTGCTCCTGAATCCAGCTGTGCACTTTGCCCAAGTGG
TGAAGGAATGCCGGGCAGTGGTCATTGCGGGGGGTACCATGCAGCCGGTGTCTGACTTCCGGCAGCAGCT
GCTGGCCTGTGCCGGGGTGGAAGCTGAGCGCGTGGTGGAGTTTTCCTGTGGTCACGTGATCCCTCCAGAC
AACATCCTGCCCCTCGTCATCTGCAGCGGGATCTCCAACCAGCCGCTGGAATTCACGTTCCAGAAAAGAG
AGCTGCCTCAGATGATGGACGAGGTGGGTCGCATTCTCTGTAACCTGTGCGGTGTGGTTCCTGGAGGGGT
GGTCTGTTTCTTCCCCTCCTACGAGTACCTGCGCCAGGTCCATGCCCACTGGGAGAAGGGTGGCCTGCTG
GGCCGTCTGGCTGCCAGGAAGAAGATATTCCAGGAACCTAAGAGCGCACACCAGGTGGAGCAGGTGCTGC
TGGCATATTCCAGGTGCATCCAGGCCTGTGGCCAGGAGAGAGGCCAGGTGACAGGGGCCCTGCTCCTCTC
TGTGGTTGGAGGAAAGATGAGTGAAGGGATCAACTTCTCTGACAACCTAGGCCGGTGTGTGGTGATGGTG
GGCATGCCCTTCCCCAACATCAGGTCTGCAGAGCTGCAGGAGAAGATGGCCTACTTGGATCAAACCCTCC
CCAGAGCCCCCGGCCAGGCACCCCCAGGGAAGGCTCTGGTGGAGAACCTGTGCATGAAGGCCGTCAACCA
GTCCATAGGCAGGGCCATCAGGCACCAGAAGGATTTTGCCAGCGTAGTGCTCCTGGACCAGCGATATGCC
CGGCCCCCTGTCCTGGCCAAGCTGCCGGCCTGGATCCGAGCCCGTGTGGAGGTCAAAGCTACCTTTGGCC
CCGCCATTGCTGCTGTGCAGAAGTTTCACCGGGAGAAGTCGGCCTCTTCCTGA

Translation (880 aa):
MAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREEEARLLETGTGPLHDEKDESLCLSS
SCEGAAGTPRPAGEPAWVTQFVQKKEERDLVDRLKAEQARRKQREERLQQLQHRVQLKYAAKRLRQEEEE
RENLLRLSREMLETGPEAERLEQLESGEEELVLAEYESDEEKKVASRVDEDEDDLEEEHITKIYYCSRTH
SQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDMQRSRHEKKKGAEEEKPKR
RRQEKQAACPFYNHEQMGLLRDEALAEVKDMEQLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAA
TRQAAGIRLQDQVVIIDEAHNLIDTITGMHSVEVSGSQLCQAHSQLLQYVERYGKRLKAKNLMYLKQILY
LLEKFVAVLGGNIKQNPNTQSLSQTGTELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYG
AVFSSREQPKLAGFQQFLQSLQPRTTEALAAPADESQASTLRPASPLMHIQGFLAALTTANQDGRVILSR
QGSLSQSTLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPD
NILPLVICSGISNQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGLL
GRLAARKKIFQEPKSAHQVEQVLLAYSRCIQACGQERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMV
GMPFPNIRSAELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASVVLLDQRYA
RPPVLAKLPAWIRARVEVKATFGPAIAAVQKFHREKSASS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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