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Report for CCDS59428.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59428.1 Public Homo sapiens 2 ZNF512 24 110 108 CCDS HistoryNCBI Gene:84450Re-query CCDS DB by CCDS ID:59428.1Re-query CCDS DB by GeneID:84450See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 59428.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000416005.6 ENSP00000407038.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000416005.6Link to Ensembl Protein Viewer:ENSP00000407038.2Re-query CCDS DB by Nucleotide ID:ENST00000416005Re-query CCDS DB by Protein ID:ENSP00000407038
Original member Current member NCBI NM_001271286.2 NP_001258215.1 Accepted alive Link to Nucleotide Sequence:NM_001271286.2Link to Protein Sequence:NP_001258215.1Re-query CCDS DB by Nucleotide ID:NM_001271286Re-query CCDS DB by Protein ID:NP_001258215Link to BLAST:NP_001258215.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001258215.1 538 Q96ME7-3 538 100% 0 0

Chromosomal Locations for CCDS 59428.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 27583113 27583142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27583658 27583716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27598070 27598254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27599583 27599678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27600691 27600815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27601356 27601442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27602463 27602561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27603140 27603307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27607845 27608039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27615168 27615269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27616262 27616324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27617473 27617571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27621153 27621461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1617 nt):
ATGTCTTCCAGACTCGGTGCTGTACCCGCCACTTCGGGACCCACAACCTTTAAGCAGCAGAGGAGCACGA
GGATCGTGGGAGCTAAGAACAGGACCCAGTGCTCCATAAAGGATAATAGTTTCCAGTACACTATCCCTCA
TGATGACTCCTTAAGTGGTTCATCGTCTGCATCTTCGTGTGAACCAGTGAGTGATTTTCCAGCATCTTTC
CGAAAATCTACCTACTGGATGAAGATGAGAAGAATCAAGCCAGCTGCTACTTCTCATGTCGAAGGGTCAG
GTGGAGTATCAGCCAAGGGGAAAAGGAAACCCAGGCAGGAAGAAGATGAAGACTATCGAGAATTTCCTCA
GAAGAAGCATAAGCTTTATGGCAGTTTGGAGGAGCAATGGTACTTAGAAATCGTTGATAAAGGCAGTGTC
TCCTGCCCTACCTGCCAGGCAGTGGGGAGGAAGACCATAGAGGGTTTAAAGAAACACATGGAAAACTGCA
AGCAGGAAATGTTTACTTGTCATCATTGTGGGAAACAACTTCGTTCACTGGCAGGGATGAAGTATCATGT
CATGGCAAATCATAATAGTTTGCCCATTTTGAAAGCCGGAGATGAAATAGATGAGCCAAGTGAGAGGGAA
AGGCTCCGAACAGTTCTAAAGAGACTGGGAAAGCTCAGGTGCATGCGTGAGAGTTGCTCCAGTAGCTTCA
CCAGCATCATGGGATATCTCTACCATGTCAGAAAATGTGGCAAAGGGGCTGCAGAGCTGGAAAAGATGAC
CCTGAAATGTCACCACTGTGGAAAACCATATAGGTCGAAGGCTGGACTTGCATATCACCTGAGGTCAGAG
CATGGGCCTATATCCTTCTTTCCAGAGTCAGGACAGCCAGAGTGCTTAAAGGAGATGAACCTAGAGTCAA
AGAGTGGGGGCCGAGTTCAGAGACGTTCTGCCAAGATAGCTGTATACCACCTACAGGAGCTGGCCTCTGC
TGAACTGGCCAAGGAATGGCCCAAGAGGAAGGTGCTTCAGGACCTGGTACCTGATGATCGAAAGTTAAAA
TATACTCGTCCAGGGCTCCCTACCTTCAGCCAGGAAGTACTACATAAATGGAAGACAGATATCAAGAAAT
ATCATCGTATTCAGTGTCCTAACCAGGGCTGTGAGGCTGTCTACAGCAGTGTATCTGGCCTTAAAGCTCA
CCTGGGCTCTTGTACATTGGGAAACTTTGTGGCTGGAAAATACAAATGTCTTCTATGTCAGAAAGAATTT
GTGTCAGAGAGTGGTGTCAAGTATCACATCAACTCCGTCCATGCTGAGGACTGGTTCGTTGTAAACCCAA
CAACAACCAAAAGCTTTGAAAAGCTGATGAAGATAAAGCAGCGGCAGCAAGAAGAAGAAAAGCGGAGGCA
GCAGCACAGGAGCAGAAGGTCTCTAAGAAGGCGGCAGCAGCCTGGCATTGAGCTTCCCGAGACAGAGCTG
AGTCTTAGAGTAGGGAAGGATCAGAGGAGGAATAATGAGGAACTGGTAGTGTCAGCCTCCTGTAAGGAAC
CAGAGCAGGAGCCAGTGCCAGCACAGTTCCAGAAAGTAAAGCCCCCAAAGACTAATCATAAACGAGGAAG
GAAATAG

Translation (538 aa):
MSSRLGAVPATSGPTTFKQQRSTRIVGAKNRTQCSIKDNSFQYTIPHDDSLSGSSSASSCEPVSDFPASF
RKSTYWMKMRRIKPAATSHVEGSGGVSAKGKRKPRQEEDEDYREFPQKKHKLYGSLEEQWYLEIVDKGSV
SCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPILKAGDEIDEPSERE
RLRTVLKRLGKLRCMRESCSSSFTSIMGYLYHVRKCGKGAAELEKMTLKCHHCGKPYRSKAGLAYHLRSE
HGPISFFPESGQPECLKEMNLESKSGGRVQRRSAKIAVYHLQELASAELAKEWPKRKVLQDLVPDDRKLK
YTRPGLPTFSQEVLHKWKTDIKKYHRIQCPNQGCEAVYSSVSGLKAHLGSCTLGNFVAGKYKCLLCQKEF
VSESGVKYHINSVHAEDWFVVNPTTTKSFEKLMKIKQRQQEEEKRRQQHRSRRSLRRRQQPGIELPETEL
SLRVGKDQRRNNEELVVSASCKEPEQEPVPAQFQKVKPPKTNHKRGRK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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