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Report for CCDS607.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
607.1 Public Homo sapiens 1 DAB1 24 110 108 CCDS HistoryNCBI Gene:1600Re-query CCDS DB by CCDS ID:607.1Re-query CCDS DB by GeneID:1600See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 607.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371236.7 ENSP00000360280.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000371236.7Link to Ensembl Protein Viewer:ENSP00000360280.1Re-query CCDS DB by Nucleotide ID:ENST00000371236Re-query CCDS DB by Protein ID:ENSP00000360280
Original member Current member EBI ENST00000414851.6 ENSP00000387581.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000414851.6Link to Ensembl Protein Viewer:ENSP00000387581.3Re-query CCDS DB by Nucleotide ID:ENST00000414851Re-query CCDS DB by Protein ID:ENSP00000387581
Original member Current member NCBI NM_001353983.2 NP_001340912.1 Accepted alive Link to Nucleotide Sequence:NM_001353983.2Link to Protein Sequence:NP_001340912.1Re-query CCDS DB by Nucleotide ID:NM_001353983Re-query CCDS DB by Protein ID:NP_001340912Link to BLAST:NP_001340912.1
Original member Current member NCBI NM_001353985.2 NP_001340914.1 Accepted alive Link to Nucleotide Sequence:NM_001353985.2Link to Protein Sequence:NP_001340914.1Re-query CCDS DB by Nucleotide ID:NM_001353985Re-query CCDS DB by Protein ID:NP_001340914Link to BLAST:NP_001340914.1
Original member Current member NCBI NM_001365792.1 NP_001352721.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001365792.1Link to Protein Sequence:NP_001352721.1Re-query CCDS DB by Nucleotide ID:NM_001365792Re-query CCDS DB by Protein ID:NP_001352721Link to BLAST:NP_001352721.1
Original member Current member NCBI NM_001365793.1 NP_001352722.1 Accepted alive Link to Nucleotide Sequence:NM_001365793.1Link to Protein Sequence:NP_001352722.1Re-query CCDS DB by Nucleotide ID:NM_001365793Re-query CCDS DB by Protein ID:NP_001352722Link to BLAST:NP_001352722.1
Original member Current member NCBI NM_001379462.1 NP_001366391.1 Accepted alive Link to Nucleotide Sequence:NM_001379462.1Link to Protein Sequence:NP_001366391.1Re-query CCDS DB by Nucleotide ID:NM_001379462Re-query CCDS DB by Protein ID:NP_001366391Link to BLAST:NP_001366391.1
Original member Current member NCBI NM_021080.5 NP_066566.3 Accepted alive Link to Nucleotide Sequence:NM_021080.5Link to Protein Sequence:NP_066566.3Re-query CCDS DB by Nucleotide ID:NM_021080Re-query CCDS DB by Protein ID:NP_066566Link to BLAST:NP_066566.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001340912.1 555 O75553-6 555 100% 0 0
NP_001340914.1 555 O75553-6 555 100% 0 0
NP_001352721.1 555 O75553-6 555 100% 0 0
NP_001352722.1 555 O75553-6 555 100% 0 0
NP_001366391.1 555 O75553-6 555 100% 0 0
NP_066566.3 555 O75553-6 555 100% 0 0

Chromosomal Locations for CCDS 607.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 57010695 57010790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 57011145 57011272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 57014883 57015431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 57023531 57023639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 57025981 57026043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 57062884 57062943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 57069360 57069425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 57071023 57071061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 57071522 57071641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 57072283 57072414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 57136543 57136641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 57145290 57145429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 57290964 57291030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1668 nt):
ATGTCAACTGAGACAGAACTTCAAGTAGCTGTGAAAACCAGCGCCAAGAAAGACTCCAGAAAGAAAGGTC
AGGATCGCAGTGAAGCCACTTTGATAAAGAGGTTTAAAGGTGAAGGGGTCCGGTACAAAGCCAAATTGAT
CGGGATTGATGAAGTTTCCGCAGCTCGGGGAGACAAGTTATGTCAAGATTCCATGATGAAACTCAAGGGC
GTTGTTGCTGGCGCTCGTTCCAAAGGAGAACACAAACAGAAAATCTTTTTAACCATCTCCTTTGGAGGAA
TCAAAATCTTTGATGAGAAGACAGGGGCCCTTCAGCATCATCATGCTGTTCATGAAATATCCTACATTGC
AAAGGACATTACAGATCACCGGGCCTTTGGATATGTTTGTGGGAAGGAAGGGAATCACAGATTTGTGGCC
ATAAAAACAGCCCAGGCGGCTGAACCTGTTATTCTGGACTTGAGAGATCTCTTTCAACTCATTTATGAAT
TGAAGCAAAGAGAAGAATTAGAAAAAAAGGCACAAAAGGATAAGCAGTGTGAACAAGCTGTGTACCAGAC
AATATTGGAAGAGGATGTTGAAGATCCTGTGTACCAGTACATTGTGTTTGAGGCTGGACACGAGCCAATC
CGTGATCCCGAAACGGAAGAAAACATTTATCAGGTTCCCACCAGCCAAAAGAAGGAAGGTGTTTATGATG
TGCCAAAAAGTCAACCTGTAAGTGCTGTGACCCAATTAGAACTTTTTGGGGACATGTCCACACCCCCTGA
TATAACCTCTCCCCCCACTCCTGCAACTCCAGGTGATGCCTTTATCCCATCTTCATCTCAGACCCTTCCA
GCGAGTGCAGATGTGTTTAGTTCTGTACCTTTCGGCACTGCTGCTGTACCCTCAGGTTACGTTGCAATGG
GCGCTGTCCTCCCGTCCTTCTGGGGTCAGCAGCCCCTCGTCCAACAGCAGATGGTCATGGGTGCCCAGCC
ACCAGTCGCTCAGGTGATGCCGGGGGCTCAGCCCATCGCATGGGGCCAGCCGGGTCTCTTTCCTGCCACT
CAGCAGCCCTGGCCAACTGTGGCCGGGCAGTTTCCGCCAGCCGCCTTCATGCCCACACAAACTGTTATGC
CTTTGCCAGCTGCCATGTTCCAAGGTCCCCTCACCCCCCTTGCCACCGTCCCAGGCACGAGTGACTCCAC
CAGGTCAAGTCCACAGACCGACAAGCCCAGGCAGAAAATGGGCAAAGAAACGTTTAAGGATTTCCAGATG
GCCCAGCCTCCGCCCGTGCCCTCCCGCAAACCCGACCAGCCCTCCCTCACCTGTACCTCAGAGGCCTTCT
CCAGTTACTTCAACAAAGTCGGGGTGGCACAGGATACAGACGACTGTGATGACTTTGACATCTCCCAGTT
GAATTTGACCCCTGTGACTTCTACCACACCATCGACCAACTCACCTCCAACCCCAGCCCCTAGACAGAGC
TCTCCATCCAAATCATCTGCATCCCATGCCAGTGATCCTACCACAGATGACATCTTTGAAGAGGGCTTTG
AAAGTCCCAGCAAAAGCGAAGAGCAAGAAGCTCCTGATGGATCACAGGCCTCATCCAACAGTGATCCATT
TGGTGAGCCCAGTGGGGAGCCCAGTGGTGATAATATAAGTCCACAGGCCGGTAGCTAG

Translation (555 aa):
MSTETELQVAVKTSAKKDSRKKGQDRSEATLIKRFKGEGVRYKAKLIGIDEVSAARGDKLCQDSMMKLKG
VVAGARSKGEHKQKIFLTISFGGIKIFDEKTGALQHHHAVHEISYIAKDITDHRAFGYVCGKEGNHRFVA
IKTAQAAEPVILDLRDLFQLIYELKQREELEKKAQKDKQCEQAVYQTILEEDVEDPVYQYIVFEAGHEPI
RDPETEENIYQVPTSQKKEGVYDVPKSQPVSAVTQLELFGDMSTPPDITSPPTPATPGDAFIPSSSQTLP
ASADVFSSVPFGTAAVPSGYVAMGAVLPSFWGQQPLVQQQMVMGAQPPVAQVMPGAQPIAWGQPGLFPAT
QQPWPTVAGQFPPAAFMPTQTVMPLPAAMFQGPLTPLATVPGTSDSTRSSPQTDKPRQKMGKETFKDFQM
AQPPPVPSRKPDQPSLTCTSEAFSSYFNKVGVAQDTDDCDDFDISQLNLTPVTSTTPSTNSPPTPAPRQS
SPSKSSASHASDPTTDDIFEEGFESPSKSEEQEAPDGSQASSNSDPFGEPSGEPSGDNISPQAGS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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