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Report for CCDS60976.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
60976.1 Public Homo sapiens 11 RNF214 24 110 108 CCDS HistoryNCBI Gene:257160Re-query CCDS DB by CCDS ID:60976.1Re-query CCDS DB by GeneID:257160See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 60976.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000531287.5 ENSP00000435361.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000531287.5Link to Ensembl Protein Viewer:ENSP00000435361.1Re-query CCDS DB by Nucleotide ID:ENST00000531287Re-query CCDS DB by Protein ID:ENSP00000435361
Original member Current member NCBI NM_001278249.2 NP_001265178.1 Accepted alive Link to Nucleotide Sequence:NM_001278249.2Link to Protein Sequence:NP_001265178.1Re-query CCDS DB by Nucleotide ID:NM_001278249Re-query CCDS DB by Protein ID:NP_001265178Link to BLAST:NP_001265178.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001265178.1 548 Q8ND24-2 548 100% 0 0

Chromosomal Locations for CCDS 60976.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 117234273 117234379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117238601 117238646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117239801 117239860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117244445 117244585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117246809 117246948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117279908 117280004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117280171 117280259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117281314 117281404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117281600 117281698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117281894 117282270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117282404 117282536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117282746 117282850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117283115 117283210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117285086 117285151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1647 nt):
ATGGCAGCGTCTGAGGTTGCTGGTGTTGTGGCCAATGCCCCCAGTCCTCCGGAATCTTCTAGTTTATGTG
CTTCCAAATCAGACGAAGGTCTCCCAGATGGTCTAAGCACCAAAGACTCTGCACAGAAGCAGAAGAACTC
GCCTCTGTTGAGTACTGACTTTAAGACAGCTGATTCAGAGGTAAACACAGATCAAGATATTGAAAAGAAT
TTGGATAAAATGATGACAGAGAGAACCCTGTTGAAAGAGCGTTACCAGGAGGTCCTGGACAAACAGAGGC
AAGTGGAGAATCAGCTCCAAGTGCAATTAAAGCAGCTTCAGCAAAGGAGAGAAGAGGAAATGAAGAATCA
CCAGGAGATATTAAAGGCTATTCAGGATGTGACAATAAAGCGGGAAGAAACAAAGAAGAAGATAGAGAAA
GAGAAGAAGGAGTTTTTGCAGAAGGAGCAGGATCTGAAAGCTGAAATTGAGAAGCTTTGTGAGAAGGGCA
GAAGAGAGGTGTGGGAAATGGAACTGGATAGACTCAAGAATCAGGATGGCGAAATAAATAGGAACATTAT
GGAAGAGACTGAACGGGCCTGGAAGGCAGAGATCTTATCACTAGAGAGCCGGAAAGAGTTACTGGTACTG
AAACTAGAAGAAGCAGAAAAAGAGGCAGAATTGCACCTTACTTACCTCAAGTCAACTCCCCCAACACTGG
AGACAGTTCGTTCCAAACAGGAGTGGGAGACGAGACTGAATGGAGTTCGGATAATGAAAAAGAATGTTCG
TGACCAATTTAATAGTCATATCCAGTTAGTGAGGAACGGAGCCAAGCTGAGCAGCCTTCCTCAAATCCCT
ACTCCCACTTTACCTCCACCCCCATCAGAGACAGACTTCATGCTTCAGGTGTTTCAACCCAGTCCCTCTC
TGGCTCCTCGGATGCCCTTCTCCATTGGGCAGGTCACAATGCCCATGGTTATGCCCAGTGCAGATCCCCG
CTCCTTGTCTTTCCCAATCCTGAACCCTGCCCTTTCCCAGCCCAGCCAGCCTTCCTCACCCCTTCCTGGC
TCCCATGGCAGAAATAGCCCTGGCTTGGGTTCCCTTGTCAGCCCCCACGGTCCACACATGCCCCCTGCCG
CCTCCATCCCACCTCCCCCAGGCTTGGGCGGTGTTAAGGCTTCTGCTGAAACTCCCCGGCCCCAACCAGT
AGACAAACTGGAGAAGATCCTGGAGAAGCTGCTGACCCGGTTCCCACAGTGCAATAAGGCCCAGATGACC
AACATTCTTCAGCAGATCAAGACAGCACGTACCACCATGGCAGGCCTGACCATGGAGGAACTTATCCAGT
TGGTTGCTGCACGACTGGCAGAACATGAGCGGGTGGCAGCAAGTACTCAGCCACTTGGTCGCATCCGGGC
CTTGTTCCCTGCTCCACTGGCCCAAATCAGTACCCCAATGTTCTTGCCTTCTGCCCAAGTTTCATATCCT
GGAAGGTCTTCACATGCTCCAGCCACCTGTAAGCTATGTCTAATGTGCCAGAAACTCGTCCAGCCCAGTG
AGCTGCATCCAATGGCGTGTACCCATGTATTGCACAAGGAGTGTATCAAATTCTGGGCCCAGACCAACAC
AAATGACACTTGTCCCTTTTGTCCAACTCTTAAATGA

Translation (548 aa):
MAASEVAGVVANAPSPPESSSLCASKSDEGLPDGLSTKDSAQKQKNSPLLSTDFKTADSEVNTDQDIEKN
LDKMMTERTLLKERYQEVLDKQRQVENQLQVQLKQLQQRREEEMKNHQEILKAIQDVTIKREETKKKIEK
EKKEFLQKEQDLKAEIEKLCEKGRREVWEMELDRLKNQDGEINRNIMEETERAWKAEILSLESRKELLVL
KLEEAEKEAELHLTYLKSTPPTLETVRSKQEWETRLNGVRIMKKNVRDQFNSHIQLVRNGAKLSSLPQIP
TPTLPPPPSETDFMLQVFQPSPSLAPRMPFSIGQVTMPMVMPSADPRSLSFPILNPALSQPSQPSSPLPG
SHGRNSPGLGSLVSPHGPHMPPAASIPPPPGLGGVKASAETPRPQPVDKLEKILEKLLTRFPQCNKAQMT
NILQQIKTARTTMAGLTMEELIQLVAARLAEHERVAASTQPLGRIRALFPAPLAQISTPMFLPSAQVSYP
GRSSHAPATCKLCLMCQKLVQPSELHPMACTHVLHKECIKFWAQTNTNDTCPFCPTLK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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