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Report for CCDS63407.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
63407.1 Public Homo sapiens 22 TANGO2 24 110 108 CCDS HistoryNCBI Gene:128989Re-query CCDS DB by CCDS ID:63407.1Re-query CCDS DB by GeneID:128989See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 63407.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000432883.5 ENSP00000402926.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000432883.5Link to Ensembl Protein Viewer:ENSP00000402926.2Re-query CCDS DB by Nucleotide ID:ENST00000432883Re-query CCDS DB by Protein ID:ENSP00000402926
Original member Current member NCBI NM_001283235.3 NP_001270164.1 Accepted alive Link to Nucleotide Sequence:NM_001283235.3Link to Protein Sequence:NP_001270164.1Re-query CCDS DB by Nucleotide ID:NM_001283235Re-query CCDS DB by Protein ID:NP_001270164Link to BLAST:NP_001270164.1
Original member Current member NCBI NM_001322171.2 NP_001309100.1 Accepted alive Link to Nucleotide Sequence:NM_001322171.2Link to Protein Sequence:NP_001309100.1Re-query CCDS DB by Nucleotide ID:NM_001322171Re-query CCDS DB by Protein ID:NP_001309100Link to BLAST:NP_001309100.1
Original member Current member NCBI NM_001322172.2 NP_001309101.1 Accepted alive Link to Nucleotide Sequence:NM_001322172.2Link to Protein Sequence:NP_001309101.1Re-query CCDS DB by Nucleotide ID:NM_001322172Re-query CCDS DB by Protein ID:NP_001309101Link to BLAST:NP_001309101.1
Original member Current member NCBI NM_001322173.2 NP_001309102.1 Accepted alive Link to Nucleotide Sequence:NM_001322173.2Link to Protein Sequence:NP_001309102.1Re-query CCDS DB by Nucleotide ID:NM_001322173Re-query CCDS DB by Protein ID:NP_001309102Link to BLAST:NP_001309102.1
Original member Current member NCBI NM_001322174.2 NP_001309103.1 Accepted alive Link to Nucleotide Sequence:NM_001322174.2Link to Protein Sequence:NP_001309103.1Re-query CCDS DB by Nucleotide ID:NM_001322174Re-query CCDS DB by Protein ID:NP_001309103Link to BLAST:NP_001309103.1
Original member Current member NCBI NM_001322175.2 NP_001309104.1 Accepted alive Link to Nucleotide Sequence:NM_001322175.2Link to Protein Sequence:NP_001309104.1Re-query CCDS DB by Nucleotide ID:NM_001322175Re-query CCDS DB by Protein ID:NP_001309104Link to BLAST:NP_001309104.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001270164.1 178 Q6ICL3-5 178 100% 0 0
NP_001309100.1 178 Q6ICL3-5 178 100% 0 0
NP_001309101.1 178 Q6ICL3-5 178 100% 0 0
NP_001309102.1 178 Q6ICL3-5 178 100% 0 0
NP_001309103.1 178 Q6ICL3-5 178 100% 0 0
NP_001309104.1 178 Q6ICL3-5 178 100% 0 0

Chromosomal Locations for CCDS 63407.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 20052499 20052584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20055943 20056013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20061530 20061683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20063338 20063442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20064542 20064662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (537 nt):
ATGGCTGGGCATCAGCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCCGCAGCTGGACTGG
CAGGCCCGAGGGCGAGCACAGCAAAGGGAGACGTCATTTGCTACTATGGGAACCGAGGGGAGCCTGATCC
TATCGTTTTGACGCCAGGCACCTACGGGCTGAGCAACGCGCTGCTGGAGACTCCCTGGAGGAAGCTGTGC
TTTGGGAAGCAGCTCTTCCTGGAGGCTGTGGAACGGAGCCAGGCGCTGCCCAAGGATGTGCTCATCGCCA
GCCTCCTGGATGTGCTCAACAATGAAGAGGCGCAGCTGCCAGACCCGGCCATCGAGGACCAGGGTGGGGA
GTACGTGCAGCCCATGCTGAGCAAGTACGCGGCTGTGTGCGTGCGCTGCCCTGGCTACGGCACCAGAACC
AACACTATCATCCTGGTAGATGCGGACGGCCACGTGACCTTCACTGAGCGTAGCATGATGGACAAGGACC
TCTCCCACTGGGAGACCAGAACCTATGAGTTCACACTGCAGAGCTAA

Translation (178 aa):
MAGHQHTWQAGSTHQLPAAAAGLAGPRASTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKLC
FGKQLFLEAVERSQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTRT
NTIILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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