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Report for CCDS7728.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7728.1 Public Homo sapiens 11 IGF2 24 110 108 CCDS HistoryNCBI Gene:3481Re-query CCDS DB by CCDS ID:7728.1Re-query CCDS DB by GeneID:3481See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7728.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000381389.5 ENSP00000370796.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000381389.5Link to Ensembl Protein Viewer:ENSP00000370796.1Re-query CCDS DB by Nucleotide ID:ENST00000381389Re-query CCDS DB by Protein ID:ENSP00000370796
Original member Current member EBI ENST00000381395.5 ENSP00000370802.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000381395.5Link to Ensembl Protein Viewer:ENSP00000370802.1Re-query CCDS DB by Nucleotide ID:ENST00000381395Re-query CCDS DB by Protein ID:ENSP00000370802
Original member Current member EBI ENST00000418738.2 ENSP00000402047.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000418738.2Link to Ensembl Protein Viewer:ENSP00000402047.2Re-query CCDS DB by Nucleotide ID:ENST00000418738Re-query CCDS DB by Protein ID:ENSP00000402047
Original member Current member EBI ENST00000416167.7 ENSP00000414497.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000416167.7Link to Ensembl Protein Viewer:ENSP00000414497.2Re-query CCDS DB by Nucleotide ID:ENST00000416167Re-query CCDS DB by Protein ID:ENSP00000414497
Original member Current member EBI ENST00000695541.1 ENSP00000511997.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000695541.1Link to Ensembl Protein Viewer:ENSP00000511997.1Re-query CCDS DB by Nucleotide ID:ENST00000695541Re-query CCDS DB by Protein ID:ENSP00000511997
Original member Current member EBI ENST00000481781.3 ENSP00000511998.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000481781.3Link to Ensembl Protein Viewer:ENSP00000511998.1Re-query CCDS DB by Nucleotide ID:ENST00000481781Re-query CCDS DB by Protein ID:ENSP00000511998
Original member Current member NCBI NM_000612.6 NP_000603.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000612.6Link to Protein Sequence:NP_000603.1Re-query CCDS DB by Nucleotide ID:NM_000612Re-query CCDS DB by Protein ID:NP_000603Link to BLAST:NP_000603.1
Original member Current member NCBI NM_001007139.6 NP_001007140.2 Accepted alive Link to Nucleotide Sequence:NM_001007139.6Link to Protein Sequence:NP_001007140.2Re-query CCDS DB by Nucleotide ID:NM_001007139Re-query CCDS DB by Protein ID:NP_001007140Link to BLAST:NP_001007140.2
Original member Current member NCBI NM_001291861.3 NP_001278790.1 Accepted alive Link to Nucleotide Sequence:NM_001291861.3Link to Protein Sequence:NP_001278790.1Re-query CCDS DB by Nucleotide ID:NM_001291861Re-query CCDS DB by Protein ID:NP_001278790Link to BLAST:NP_001278790.1
Original member Current member NCBI NM_001291862.3 NP_001278791.1 Accepted alive Link to Nucleotide Sequence:NM_001291862.3Link to Protein Sequence:NP_001278791.1Re-query CCDS DB by Nucleotide ID:NM_001291862Re-query CCDS DB by Protein ID:NP_001278791Link to BLAST:NP_001278791.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000603.1 180 P01344-1 180 100% 0 0
NP_001007140.2 180 P01344-1 180 100% 0 0
NP_001278790.1 180 P01344-1 180 100% 0 0
NP_001278791.1 180 P01344-1 180 100% 0 0

Chromosomal Locations for CCDS 7728.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 2132987 2133223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 2133517 2133665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 2135367 2135523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (543 nt):
ATGGGAATCCCAATGGGGAAGTCGATGCTGGTGCTTCTCACCTTCTTGGCCTTCGCCTCGTGCTGCATTG
CTGCTTACCGCCCCAGTGAGACCCTGTGCGGCGGGGAGCTGGTGGACACCCTCCAGTTCGTCTGTGGGGA
CCGCGGCTTCTACTTCAGCAGGCCCGCAAGCCGTGTGAGCCGTCGCAGCCGTGGCATCGTTGAGGAGTGC
TGTTTCCGCAGCTGTGACCTGGCCCTCCTGGAGACGTACTGTGCTACCCCCGCCAAGTCCGAGAGGGACG
TGTCGACCCCTCCGACCGTGCTTCCGGACAACTTCCCCAGATACCCCGTGGGCAAGTTCTTCCAATATGA
CACCTGGAAGCAGTCCACCCAGCGCCTGCGCAGGGGCCTGCCTGCCCTCCTGCGTGCCCGCCGGGGTCAC
GTGCTCGCCAAGGAGCTCGAGGCGTTCAGGGAGGCCAAACGTCACCGTCCCCTGATTGCTCTACCCACCC
AAGACCCCGCCCACGGGGGCGCCCCCCCAGAGATGGCCAGCAATCGGAAGTGA

Translation (180 aa):
MGIPMGKSMLVLLTFLAFASCCIAAYRPSETLCGGELVDTLQFVCGDRGFYFSRPASRVSRRSRGIVEEC
CFRSCDLALLETYCATPAKSERDVSTPPTVLPDNFPRYPVGKFFQYDTWKQSTQRLRRGLPALLRARRGH
VLAKELEAFREAKRHRPLIALPTQDPAHGGAPPEMASNRK


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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