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Report for CCDS7764.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7764.1 Public Homo sapiens 11 TRIM3 24 110 108 CCDS HistoryNCBI Gene:10612Re-query CCDS DB by CCDS ID:7764.1Re-query CCDS DB by GeneID:10612See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7764.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000345851.8 ENSP00000340797.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000345851.8Link to Ensembl Protein Viewer:ENSP00000340797.3Re-query CCDS DB by Nucleotide ID:ENST00000345851Re-query CCDS DB by Protein ID:ENSP00000340797
Original member Current member EBI ENST00000359518.7 ENSP00000352508.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000359518.7Link to Ensembl Protein Viewer:ENSP00000352508.3Re-query CCDS DB by Nucleotide ID:ENST00000359518Re-query CCDS DB by Protein ID:ENSP00000352508
Original member Current member EBI ENST00000525074.5 ENSP00000433102.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000525074.5Link to Ensembl Protein Viewer:ENSP00000433102.1Re-query CCDS DB by Nucleotide ID:ENST00000525074Re-query CCDS DB by Protein ID:ENSP00000433102
Original member Current member NCBI NM_001248006.2 NP_001234935.1 Accepted alive Link to Nucleotide Sequence:NM_001248006.2Link to Protein Sequence:NP_001234935.1Re-query CCDS DB by Nucleotide ID:NM_001248006Re-query CCDS DB by Protein ID:NP_001234935Link to BLAST:NP_001234935.1
Original member Current member NCBI NM_006458.4 NP_006449.2 Accepted alive Link to Nucleotide Sequence:NM_006458.4Link to Protein Sequence:NP_006449.2Re-query CCDS DB by Nucleotide ID:NM_006458Re-query CCDS DB by Protein ID:NP_006449Link to BLAST:NP_006449.2
Original member Current member NCBI NM_033278.4 NP_150594.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033278.4Link to Protein Sequence:NP_150594.2Re-query CCDS DB by Nucleotide ID:NM_033278Re-query CCDS DB by Protein ID:NP_150594Link to BLAST:NP_150594.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001234935.1 744 O75382-1 744 100% 0 0
NP_006449.2 744 O75382-1 744 100% 0 0
NP_150594.2 744 O75382-1 744 100% 0 0

Chromosomal Locations for CCDS 7764.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 6449028 6449180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6449306 6449446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6450551 6450621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6450892 6451060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6451271 6451438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6456072 6456175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6456297 6457029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6457296 6457476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6457696 6457847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6458065 6458296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6465565 6465695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2235 nt):
ATGGCAAAGAGGGAGGACAGCCCTGGCCCAGAGGTCCAGCCAATGGACAAGCAGTTCCTGGTATGCAGCA
TCTGCCTGGATCGGTACCAGTGCCCCAAGGTTCTTCCTTGCCTGCACACCTTCTGTGAGAGATGTCTCCA
AAACTATATCCCTGCCCAGAGCCTGACGCTATCCTGTCCAGTATGCCGGCAGACGTCCATCCTCCCAGAG
CAGGGCGTCTCGGCACTGCAGAACAACTTCTTCATCAGCAGCCTCATGGAGGCAATGCAGCAGGCACCTG
ATGGGGCCCACGACCCGGAGGACCCCCACCCCCTCAGTGTAGTGGCTGGCCGCCCTCTCTCCTGCCCCAA
CCATGAAGGCAAGACGATGGAGTTTTACTGTGAGGCCTGTGAGACGGCCATGTGTGGTGAGTGCCGCGCC
GGGGAGCATCGTGAGCATGGCACAGTGCTGCTGAGGGATGTGGTGGAGCAGCACAAGGCGGCCCTGCAGC
GCCAGCTCGAGGCTGTGCGTGGCCGATTGCCACAGCTGTCCGCAGCAATTGCCTTAGTCGGGGGCATCAG
CCAGCAGCTGCAGGAGCGCAAGGCAGAGGCCCTGGCCCAGATCAGTGCAGCGTTCGAGGACCTGGAGCAA
GCACTGCAGCAGCGCAAGCAGGCTCTGGTCAGCGACCTGGAGACCATTTGTGGGGCCAAACAGAAGGTGT
TGCAAAGCCAGCTGGACACACTGCGCCAGGGTCAGGAACACATCGGCAGTAGCTGCAGCTTTGCAGAGCA
GGCACTGCGCCTGGGCTCGGCCCCGGAGGTGTTGCTGGTGCGCAAGCACATGCGAGAGCGGCTGGCTGCA
TTGGCGGCACAGGCCTTCCCGGAGCGGCCACATGAGAATGCACAGCTGGAACTGGTCCTTGAGGTGGACG
GTCTGCGGCGATCGGTGCTCAATCTGGGCGCACTGCTCACCACGAGCGCCACTGCACACGAAACGGTGGC
CACGGGAGAGGGCCTGCGCCAGGCGCTAGTGGGCCAGCCTGCCTCGCTCACTGTCACTACCAAAGACAAG
GACGGGCGGTTGGTGCGCACAGGCAGCGCTGAGCTGCGTGCAGAGATCACCGGCCCGGACGGCACGCGCC
TTCCGGTGCCAGTGGTGGACCACAAGAATGGCACATATGAGCTAGTGTACACAGCGCGCACGGAAGGCGA
GCTGCTCCTCTCGGTGCTGCTCTACGGACAGCCAGTGCGCGGCAGCCCCTTCCGCGTGCGTGCCCTGCGT
CCGGGGGACCTGCCACCTTCCCCGGACGATGTGAAGCGCCGTGTCAAGTCCCCTGGCGGCCCCGGCAGCC
ATGTGCGCCAGAAGGCAGTGCGTAGGCCCAGCTCCATGTACAGCACAGGCGGCAAACGAAAGGACAACCC
AATTGAGGATGAGCTCGTCTTCCGTGTTGGCAGTCGTGGAAGGGAGAAAGGTGAATTCACCAATTTACAA
GGTGTGTCCGCAGCCAGCAGCGGCCGCATCGTGGTAGCAGACAGCAACAACCAGTGTATTCAGGTTTTCT
CCAATGAGGGCCAGTTCAAGTTCCGTTTTGGGGTCCGAGGACGCTCACCTGGGCAGCTGCAGCGCCCCAC
AGGTGTGGCAGTGGACACCAATGGAGACATAATTGTGGCAGACTATGACAACCGTTGGGTCAGCATCTTC
TCCCCTGAGGGCAAGTTCAAGACCAAGATTGGAGCTGGCCGCCTCATGGGCCCCAAGGGAGTGGCCGTAG
ACCGGAATGGACATATCATTGTGGTCGACAACAAGTCTTGCTGCGTCTTTACCTTCCAGCCCAATGGCAA
ACTGGTTGGCCGTTTTGGGGGCCGTGGGGCCACTGACCGCCACTTTGCAGGGCCCCATTTTGTGGCTGTG
AACAACAAGAATGAAATTGTAGTAACGGACTTCCATAACCATTCAGTGAAGGTGTACAGTGCCGATGGAG
AGTTCCTCTTCAAGTTTGGCTCCCATGGCGAGGGCAATGGGCAGTTCAATGCCCCCACAGGAGTAGCTGT
GGACTCCAATGGAAACATCATTGTGGCTGACTGGGGCAACAGCCGCATCCAGGTATTCGACAGCTCTGGC
TCCTTCCTGTCCTATATCAACACATCTGCAGAACCACTGTATGGTCCACAGGGCCTGGCACTGACCTCGG
ATGGCCATGTGGTGGTGGCTGATGCTGGCAACCACTGCTTTAAAGCCTATCGCTACCTCCAGTAG

Translation (744 aa):
MAKREDSPGPEVQPMDKQFLVCSICLDRYQCPKVLPCLHTFCERCLQNYIPAQSLTLSCPVCRQTSILPE
QGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEGKTMEFYCEACETAMCGECRA
GEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLPQLSAAIALVGGISQQLQERKAEALAQISAAFEDLEQ
ALQQRKQALVSDLETICGAKQKVLQSQLDTLRQGQEHIGSSCSFAEQALRLGSAPEVLLVRKHMRERLAA
LAAQAFPERPHENAQLELVLEVDGLRRSVLNLGALLTTSATAHETVATGEGLRQALVGQPASLTVTTKDK
DGRLVRTGSAELRAEITGPDGTRLPVPVVDHKNGTYELVYTARTEGELLLSVLLYGQPVRGSPFRVRALR
PGDLPPSPDDVKRRVKSPGGPGSHVRQKAVRRPSSMYSTGGKRKDNPIEDELVFRVGSRGREKGEFTNLQ
GVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF
SPEGKFKTKIGAGRLMGPKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAV
NNKNEIVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSG
SFLSYINTSAEPLYGPQGLALTSDGHVVVADAGNHCFKAYRYLQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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