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Report for CCDS77806.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77806.1 Public Homo sapiens 3 CCDC14 24 110 108 CCDS HistoryNCBI Gene:64770Re-query CCDS DB by CCDS ID:77806.1Re-query CCDS DB by GeneID:64770See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77806.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000485727.5 ENSP00000418002.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000485727.5Link to Ensembl Protein Viewer:ENSP00000418002.1Re-query CCDS DB by Nucleotide ID:ENST00000485727Re-query CCDS DB by Protein ID:ENSP00000418002
Original member Current member EBI ENST00000489746.5 ENSP00000418403.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000489746.5Link to Ensembl Protein Viewer:ENSP00000418403.1Re-query CCDS DB by Nucleotide ID:ENST00000489746Re-query CCDS DB by Protein ID:ENSP00000418403
Original member Current member NCBI NM_001308317.2 NP_001295246.1 Accepted alive Link to Nucleotide Sequence:NM_001308317.2Link to Protein Sequence:NP_001295246.1Re-query CCDS DB by Nucleotide ID:NM_001308317Re-query CCDS DB by Protein ID:NP_001295246Link to BLAST:NP_001295246.1
Original member Current member NCBI NM_001366336.1 NP_001353265.1 Accepted alive Link to Nucleotide Sequence:NM_001366336.1Link to Protein Sequence:NP_001353265.1Re-query CCDS DB by Nucleotide ID:NM_001366336Re-query CCDS DB by Protein ID:NP_001353265Link to BLAST:NP_001353265.1
Original member Current member NCBI NM_001366337.1 NP_001353266.1 Accepted alive Link to Nucleotide Sequence:NM_001366337.1Link to Protein Sequence:NP_001353266.1Re-query CCDS DB by Nucleotide ID:NM_001366337Re-query CCDS DB by Protein ID:NP_001353266Link to BLAST:NP_001353266.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001295246.1 753 Q49A88-2 753 100% 0 0
NP_001353265.1 753 Q49A88-2 753 100% 0 0
NP_001353266.1 753 Q49A88-2 753 100% 0 0

Chromosomal Locations for CCDS 77806.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 123914779 123915718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 123931102 123931234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 123931308 123931526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 123933673 123933755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 123944849 123944990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 123946803 123947319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 123948691 123948785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 123948896 123949028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2262 nt):
ATGTATTCACCCATAATATACCAAGCCCTCTGTGAGCACGTGCAGACTCAGATGTCACTGATGAATGACT
TGACTTCAAAGAACATCCCTAATGGAATTCCTGCTGTACCATGCCATGCTCCCTCTCATTCTGAATCTCA
GGCAACTCCTCATTCTAGTTATGGCTTATGTACCTCCACCCCAGTCTGGTCACTTCAGCGGCCACCCTGC
CCTCCAAAGGTTCATTCTGAAGTTCAAACTGATGGCAACAGTCAGTTTGCATCACAAGGTAAAACAGTTT
CTGCAACCTGTACTGATGTTCTACGGAATTCATTTAATACCAGTCCTGGAGTTCCATGTAGCCTGCCCAA
AACTGACATATCAGCTATTCCAACATTGCAGCAACTGGGCCTTGTTAATGGAATTCTGCCACAACAAGGA
ATTCATAAGGAAACAGACCTACTAAAATGTATTCAAACATATTTGTCTCTTTTTCGATCTCATGGAAAAG
AAACGCATCTGGACAGTCAGACACACCGAAGCCCTACTCAGTCACAACCAGCTTTCTTGGCCACTAATGA
AGAAAAATGTGCCAGAGAGCAAATTAGAGAGGCCACAAGTGAAAGAAAGGATTTAAACATACATGTGCGA
GATACAAAAACAGTGAAGGATGTACAGAAGGCAAAAAATGTGAACAAGACAGCTGAAAAAGTTAGAATTA
TAAAATATTTGTTGGGAGAGCTCAAGGCCCTGGTAGCAGAACAAGAGGATTCAGAAATTCAGAGGTTGAT
TACAGAAATGGAGGCATGTATATCTGTACTTCCAACAGTAAGTGGAAACACAGATATTCAAGTTGAGATA
GCACTGGCCATGCAACCATTAAGAAGTGAGAATGCTCAGTTACGAAGGCAGTTGAGAATTTTGAACCAGC
AACTCAGAGAACAACAGAAAACTCAAAAACCATCTGGTGCTGTGGATTGCAACCTTGAATTGTTTTCTCT
TCAGTCATTGAATATGTCACTGCAAAATCAATTGGAGGAGTCACTAAAGAGCCAGGAATTACTGCAGAGT
AAAAATGAAGAGCTGTTAAAAGTGATTGAAAATCAGAAAGATGAAAACAAAAAATTTAGTAGTATATTTA
AAGACAAAGATCAAACTATACTTGAAAATAAACAGCAATATGATATTGAGATAACAAGAATAAAAATTGA
ATTGGAGGAAGCCCTAGTCAATGTGAAAAGCTCCCAGTTTAAGTTAGAAACTGCTGAAAAGGAAAACCAG
ATATTGGGGATAACATTACGTCAGCGTGATGCTGAGGTGACTCGACTAAGAGAATTAACCAGAACTTTAC
AGACTAGCATGGCAAAGCTTCTCTCCGATCTTAGTGTGGACAGTGCTCGCTGCAAGCCTGGGAATAACCT
TACCAAATCACTCTTGAACATTCATGATAAACAACTTCAACATGACCCAGCTCCTGCTCACACTTCCATA
ATGAGCTATCTAAATAAGTTAGAAACAAATTACAGTTTTACACATTCAGAGCCACTTTCTACAATTAAAA
ATGAGGAAACCATAGAGCCAGACAAAACCTATGAAAATGTTCTGTCCTCCAGAGGCCCTCAAAATAGTAA
CACTAGGGGCATGGAGGAAGCATCTGCACCTGGAATTATTTCTGCCCTTTCAAAACAGGATTCTGATGAA
GGGAGTGAAACTATGGCTTTAATAGAAGATGAGCATAATTTGGATAATACAATTTACATTCCTTTTGCTA
GAAGCACTCCTGAAAAGAAATCACCACTTTCTAAGAGACTATCCCCTCAGCCACAAATAAGAGCAGCTAC
AACACAGCTAGTCAGCAACAGCGGACTTGCTGTCTCTGGAAAAGAAAATAAACTGTGTACACCTGTAATC
TGTTCCTCTTCAACAAAGGAAGCAGAAGATGCACCTGAAAAACTTTCCAGAGCATCTGATATGAAGGACA
CACAGCTCCTCAAGAAAATAAAGGAAGCAATTGGTAAGATCCCTGCTGCCACCAAGGAGCCAGAGGAACA
AACTGCATGTCATGGCCCATCAGGTTGTCTTAGCAACAGCCTTCAAGTGAAAGGCAATACTGTCTGTGAT
GGTAGTGTTTTCACTTCTGACTTGATGTCTGACTGGAGCATCTCTTCGTTTTCAACGTTCACTTCTCGTG
ATGAACAAGACTTCAGAAATGGCCTTGCGGCATTAGATGCCAACATAGCTAGACTCCAGAAGTCTTTAAG
GACTGGTCTTCTGGAGAAATGA

Translation (753 aa):
MYSPIIYQALCEHVQTQMSLMNDLTSKNIPNGIPAVPCHAPSHSESQATPHSSYGLCTSTPVWSLQRPPC
PPKVHSEVQTDGNSQFASQGKTVSATCTDVLRNSFNTSPGVPCSLPKTDISAIPTLQQLGLVNGILPQQG
IHKETDLLKCIQTYLSLFRSHGKETHLDSQTHRSPTQSQPAFLATNEEKCAREQIREATSERKDLNIHVR
DTKTVKDVQKAKNVNKTAEKVRIIKYLLGELKALVAEQEDSEIQRLITEMEACISVLPTVSGNTDIQVEI
ALAMQPLRSENAQLRRQLRILNQQLREQQKTQKPSGAVDCNLELFSLQSLNMSLQNQLEESLKSQELLQS
KNEELLKVIENQKDENKKFSSIFKDKDQTILENKQQYDIEITRIKIELEEALVNVKSSQFKLETAEKENQ
ILGITLRQRDAEVTRLRELTRTLQTSMAKLLSDLSVDSARCKPGNNLTKSLLNIHDKQLQHDPAPAHTSI
MSYLNKLETNYSFTHSEPLSTIKNEETIEPDKTYENVLSSRGPQNSNTRGMEEASAPGIISALSKQDSDE
GSETMALIEDEHNLDNTIYIPFARSTPEKKSPLSKRLSPQPQIRAATTQLVSNSGLAVSGKENKLCTPVI
CSSSTKEAEDAPEKLSRASDMKDTQLLKKIKEAIGKIPAATKEPEEQTACHGPSGCLSNSLQVKGNTVCD
GSVFTSDLMSDWSISSFSTFTSRDEQDFRNGLAALDANIARLQKSLRTGLLEK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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