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Report for CCDS7925.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7925.1 Public Homo sapiens 11 CSTPP1 24 110 108 CCDS HistoryNCBI Gene:79096Re-query CCDS DB by CCDS ID:7925.1Re-query CCDS DB by GeneID:79096See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7925.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000278460.12 ENSP00000278460.8 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000278460.12Link to Ensembl Protein Viewer:ENSP00000278460.8Re-query CCDS DB by Nucleotide ID:ENST00000278460Re-query CCDS DB by Protein ID:ENSP00000278460
Original member Current member NCBI NM_024113.5 NP_077018.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024113.5Link to Protein Sequence:NP_077018.1Re-query CCDS DB by Nucleotide ID:NM_024113Re-query CCDS DB by Protein ID:NP_077018Link to BLAST:NP_077018.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_077018.1 331 Q9H6J7-1 331 100% 0 0

Chromosomal Locations for CCDS 7925.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 46936806 46936851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 46987208 46987310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47052388 47052518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47137645 47137729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47155176 47155261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47157023 47157218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47157813 47157922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47161127 47161190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47161464 47161638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (996 nt):
ATGCTGAGTCCGGAGCGCCTAGCCCTACCGGACTACGAGTATCTGGCTCAGCGACATGTCCTCACCTACA
TGGAGGATGCAGTGTGCCAGCTGCTAGAAAACAGGGAAGATATTAGCCAATATGGAATTGCCAGGTTCTT
CACTGAATATTTTAACAGTGTATGCCAGGGAACACACATTCTCTTTCGAGAATTCAGCTTCGTCCAAGCC
ACCCCCCACAATAGGGTATCATTTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAAAAATGGCG
ATTTGCTGACCATGAAAGAATATCACTGTTTGCTGCAATTACTGTGTCCTGATTTCCCGCTGGAGCTCAC
TCAGAAAGCAGCCAGGATTGTGCTCATGGACGATGCCATGGACTGCTTGATGTCTTTTTCAGATTTCCTC
TTTGCCTTCCAGATCCAGTTTTACTACTCAGAATTCCTGGACAGTGTGGCTGCCATCTATGAGGACCTGC
TGTCAGGCAAGAACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGCACCGCCAACGACCTGC
CTTGGGCGGGGCCGGCACGCTGGAGGGCGTGGAGGCGTCGCTGTTCTACCAGTGTCTGGAAAACCTGTGT
GATCGGCACAAGTACAGCTGCCCACCCCCAGCACTTGTCAAAGAGGCCCTCAGCAATGTTCAGAGACTGA
CCTTCTATGGATTCCTCATGGCTCTCTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAGCTTTGCCTGA
CAAGGGGGATCTGATGCACGACCCAGCAATGGATGAAGAGCTGGAACGGCTGCTGGCCCAGGTCCCAGGC
CTGGTCAACTCGGTCACAGCCAGTCCAGAGGCCAGTTGCCTGCCTTCCCGGACCCCTCCCCGGGTTGGCT
CTCCCTGGAGACCTCTCCATCATTCCCGAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGA
CGAGTCGGAGACTTGA

Translation (331 aa):
MLSPERLALPDYEYLAQRHVLTYMEDAVCQLLENREDISQYGIARFFTEYFNSVCQGTHILFREFSFVQA
TPHNRVSFLRAFWRCFRTVGKNGDLLTMKEYHCLLQLLCPDFPLELTQKAARIVLMDDAMDCLMSFSDFL
FAFQIQFYYSEFLDSVAAIYEDLLSGKNPNTVIVPTSSSGQHRQRPALGGAGTLEGVEASLFYQCLENLC
DRHKYSCPPPALVKEALSNVQRLTFYGFLMALSKHRGINQALGALPDKGDLMHDPAMDEELERLLAQVPG
LVNSVTASPEASCLPSRTPPRVGSPWRPLHHSRKVDGESDGSTEETDESET


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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