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Report for CCDS7959.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7959.1 Public Homo sapiens 11 TIMM10 24 110 108 CCDS HistoryNCBI Gene:26519Re-query CCDS DB by CCDS ID:7959.1Re-query CCDS DB by GeneID:26519See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7959.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000257245.9 ENSP00000257245.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000257245.9Link to Ensembl Protein Viewer:ENSP00000257245.4Re-query CCDS DB by Nucleotide ID:ENST00000257245Re-query CCDS DB by Protein ID:ENSP00000257245
Original member Current member EBI ENST00000525158.1 ENSP00000433627.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000525158.1Link to Ensembl Protein Viewer:ENSP00000433627.1Re-query CCDS DB by Nucleotide ID:ENST00000525158Re-query CCDS DB by Protein ID:ENSP00000433627
Original member Current member EBI ENST00000525587.1 ENSP00000435678.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000525587.1Link to Ensembl Protein Viewer:ENSP00000435678.1Re-query CCDS DB by Nucleotide ID:ENST00000525587Re-query CCDS DB by Protein ID:ENSP00000435678
Original member Current member NCBI NM_012456.3 NP_036588.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012456.3Link to Protein Sequence:NP_036588.1Re-query CCDS DB by Nucleotide ID:NM_012456Re-query CCDS DB by Protein ID:NP_036588Link to BLAST:NP_036588.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036588.1 90 P62072 90 100% 0 0

Chromosomal Locations for CCDS 7959.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 57528717 57528918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57530119 57530189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (273 nt):
ATGGATCCTCTCAGGGCCCAACAGCTGGCTGCGGAGCTGGAGGTGGAGATGATGGCCGATATGTACAACA
GAATGACCAGTGCCTGCCACCGGAAGTGTGTGCCTCCTCACTACAAGGAAGCAGAGCTCTCCAAGGGCGA
GTCTGTGTGCCTGGACCGATGTGTCTCTAAGTACCTGGACATCCATGAGCGGATGGGCAAAAAGTTGACA
GAGTTGTCTATGCAGGATGAAGAGCTGATGAAGAGGGTGCAGCAGAGCTCTGGGCCTGCATGA

Translation (90 aa):
MDPLRAQQLAAELEVEMMADMYNRMTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLDIHERMGKKLT
ELSMQDEELMKRVQQSSGPA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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