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Report for CCDS81521.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81521.1 Public Homo sapiens 10 TEX36 24 110 108 CCDS HistoryNCBI Gene:387718Re-query CCDS DB by CCDS ID:81521.1Re-query CCDS DB by GeneID:387718See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81521.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000532135.5 ENSP00000431764.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000532135.5Link to Ensembl Protein Viewer:ENSP00000431764.1Re-query CCDS DB by Nucleotide ID:ENST00000532135Re-query CCDS DB by Protein ID:ENSP00000431764
Original member Current member NCBI NM_001318133.2 NP_001305062.1 Accepted alive Link to Nucleotide Sequence:NM_001318133.2Link to Protein Sequence:NP_001305062.1Re-query CCDS DB by Nucleotide ID:NM_001318133Re-query CCDS DB by Protein ID:NP_001305062Link to BLAST:NP_001305062.1

Chromosomal Locations for CCDS 81521.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 125576749 125576874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 125661021 125661101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 125661846 125661977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 125682939 125682989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (390 nt):
ATGACCAAAGGGCGACGCTTCAACCCACCTTCAGACAAGGATGGGAGATGGTTCCCTCACATCGGGCTAA
CGCAAAAGACACCAGAATCCATCACCAGTGCTACGTCAAAAGAGCCCCAGAGTCCACACTTGCCTCGGCA
AGCGGAGGGGAAGCTGCCGCCCATATACAAAGTCCGGGAGAAGCAAGCAGTGAATAACCAGTTCCCCTTC
TCCGTGCATGACAATCGGCACAGCTTGGAGAACTCTGGATGCTACCTTGACTCCGAAAGAATGACAGCAA
CGGACCCACAGGGAGAACCAGACAAGAGACAAGAGTTCTATGAGCCGGTGAGGACCCAGTCCATTCCTCA
TCCAGGCCTGAGAACTAATGCACCCCTCCTTGCAGTGTGA

Translation (129 aa):
MTKGRRFNPPSDKDGRWFPHIGLTQKTPESITSATSKEPQSPHLPRQAEGKLPPIYKVREKQAVNNQFPF
SVHDNRHSLENSGCYLDSERMTATDPQGEPDKRQEFYEPVRTQSIPHPGLRTNAPLLAV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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