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Report for CCDS82597.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82597.1 Public Homo sapiens 20 TMEM230 24 110 108 CCDS HistoryNCBI Gene:29058Re-query CCDS DB by CCDS ID:82597.1Re-query CCDS DB by GeneID:29058See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82597.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000615008.4 ENSP00000478112.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000615008.4Link to Ensembl Protein Viewer:ENSP00000478112.1Re-query CCDS DB by Nucleotide ID:ENST00000615008Re-query CCDS DB by Protein ID:ENSP00000478112
Original member Current member EBI ENST00000612323.4 ENSP00000478641.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000612323.4Link to Ensembl Protein Viewer:ENSP00000478641.1Re-query CCDS DB by Nucleotide ID:ENST00000612323Re-query CCDS DB by Protein ID:ENSP00000478641
Original member Current member NCBI NM_001330987.2 NP_001317916.1 Accepted alive Link to Nucleotide Sequence:NM_001330987.2Link to Protein Sequence:NP_001317916.1Re-query CCDS DB by Nucleotide ID:NM_001330987Re-query CCDS DB by Protein ID:NP_001317916Link to BLAST:NP_001317916.1

Chromosomal Locations for CCDS 82597.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 5069188 5069349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 5106188 5106310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 5109332 5109430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (384 nt):
ATGATGCCGTCCCGTACCAACCTGGCTACTGGAATCCCCAGTAGTAAAGTGAAATATTCAAGGCTCTCCA
GCACAGACGATGGCTACATTGACCTTCAGTTTAAGAAAACCCCTCCTAAGATCCCTTATAAGGCCATCGC
ACTTGCCACTGTGCTGTTTTTGATTGGCGCCTTTCTCATTATTATAGGCTCCCTCCTGCTGTCAGGCTAC
ATCAGCAAAGGGAGTCTCGAATCCACCTCACGGGAACAAAAGAAAGCTGACCACAAACATCTACCAGCAT
CCCGTGGGTACATGATGGGAGGCATCAGTGGGAGGAGTCCCGAAGGAGGACTCAGCTCAAGGCTTCCAGA
AGGAAGAGGAACACAGGTGTCATCACCTGACTGA

Translation (127 aa):
MMPSRTNLATGIPSSKVKYSRLSSTDDGYIDLQFKKTPPKIPYKAIALATVLFLIGAFLIIIGSLLLSGY
ISKGSLESTSREQKKADHKHLPASRGYMMGGISGRSPEGGLSSRLPEGRGTQVSSPD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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