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Report for CCDS83233.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83233.1 Public Homo sapiens 7 DENND2A 24 110 108 CCDS HistoryNCBI Gene:27147Re-query CCDS DB by CCDS ID:83233.1Re-query CCDS DB by GeneID:27147See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83233.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000492720.5 ENSP00000419464.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000492720.5Link to Ensembl Protein Viewer:ENSP00000419464.1Re-query CCDS DB by Nucleotide ID:ENST00000492720Re-query CCDS DB by Protein ID:ENSP00000419464
Original member Current member NCBI NM_001318053.2 NP_001304982.1 Accepted alive Link to Nucleotide Sequence:NM_001318053.2Link to Protein Sequence:NP_001304982.1Re-query CCDS DB by Nucleotide ID:NM_001318053Re-query CCDS DB by Protein ID:NP_001304982Link to BLAST:NP_001304982.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001304982.1 795 Q9ULE3-2 795 100% 0 0

Chromosomal Locations for CCDS 83233.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 140544557 140544766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140546799 140546939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140555636 140555713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140558143 140558212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140559708 140559817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140567086 140567273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140568763 140568813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140569645 140569738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140573808 140574008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140585589 140585710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140587653 140587780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140601403 140602397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2388 nt):
ATGGATATGTTCAGCTTGGATATGATCATCAGTGACCCAGCTGCAGAAGCCAGCAGGGCTGGGAAGAAGC
AGCTCAGAGGTGTTCAGAACCCTTGCCCATCTGCCAGAGCCAGACCCCGGCACAAGTCCCTCAACATAAA
GGACAAGATATCAGAATGGGAAGGGAAGAAAGAGGTGCCCACTCCTGCACCCAGCAGGAGAGCAGACGGA
CAGGAGGATTATCTGCCGTCCTCTACGGTGGAGAGGAGGAGTAGTGATGGGGTGAGAACTCAGGTCACAG
AGGCTAAGAATGGAATGAGGCCAGGAACAGAGAGCACAGAGAAGGAGAGGAATAAAGGAGCAGTGAACGT
CGGGGGACAGGACCCAGAGCCGGGGCAAGACCTAAGCCAGCCAGAACGGGAAGTGGATCCTAGCTGGGGC
CGAGGCCGAGAGCCAAGACTTGGCAAGCTACGCTTTCAGAACGATCCCCTCTCCGTGCTGAAGCAGGTCA
AGAAACTCGAGCAGGCTTTGAAGGATGGGTCGGCAGGGCTGGATCCCCAGTTACCAGGGACTTGTTACTC
CCCACACTGCCCTCCTGACAAGGCAGAGGCAGGGTCCACCCTTCCTGAGAACCTGGGAGGCGGGAGTGGC
TCAGAAGTCAGCCAGAGGGTCCACCCCTCGGACCTGGAAGGCAGGGAGCCCACCCCTGAGCTTGTGGAGG
ACAGGAAAGGTTCATGCAGAAGGCCCTGGGACCGGAGCCTTGAGAACGTGTATAGGGGCTCGGAGGGTTC
CCCCACAAAGCCCTTCATCAACCCTCTGCCAAAACCCCGGAGAACGTTCAAACATGCCGGAGAAGGGGAC
AAAGATGGGAAGCCTGGCATCGGCTTCAGGAAAGAGAAAAGAAATCTGCCTCCTCTGCCCTCTCTACCTC
CCCCGCCTCTGCCCTCCTCTCCCCCACCTTCCTCTGTGAACAGAAGACTGTGGACCGGGAGACAGAAATC
CAGTGCAGACCACAGAAAGTCCTATGAGTTTGAAGATTTACTGCAGTCTTCCTCTGAGAGCAGCAGGGTG
GACTGGTACGCGCAGACTAAGCTGGGGCTGACACGCACTTTATCGGAGGAGAACGTCTATGAAGACATTC
TAGATCCGCCAATGAAGGAGAACCCTTATGAGGACATCGAGTTACATGGTCGCTGCCTGGGAAAGAAGTG
TGTCTTGAATTTTCCTGCTTCTCCCACCTCTTCCATCCCTGACACACTCACCAAGCAGTCATTGTCCAAA
CCTGCTTTTTTCCGACAAAATTCAGAGAGGAGGAACTTCAAGCTGCTGGACACTAGGAAGCTGAGTCGGG
ATGGAACTGGGTCCCCTTCCAAAATCAGCCCTCCCTCCACTCCCAGCAGCCCTGATGACATTTTCTTTAA
CCTTGGAGACCCACAGAACGGCAGGAAGAAGAGAAAGATACCCAAGCTGGTGTTGCGAATCAACGCCATT
TATGAGGTCCGGAGAGGAAAGAAACGGGTGAAGAGGCTGTCCCAGTCAATGGAGAGCAACTCAGGAAAAG
TGACAGATGAGAACAGTGAGTCTGACAGTGACACAGAGGAGAAGCTGAAAGCTCACAGCCAGCGCCTGGT
CAACGTGAAGTCCCGGCTGAAGCAGGCGCCTCGGTACCCATCACTTGCCCGGGAACTCATCGAGTACCAG
GAGAGGCAGCTCTTCGAGTACTTTGTGGTTGTGTCTTTGCACAAGAAGCAGGCCGGGGCTGCCTACGTGC
CAGAACTCACCCAACAGTTCCCTCTGAAGTTGGAAAGGTCTTTCAAGTTCATGAGAGAAGCTGAGGACCA
ACTGAAGGCCATTCCCCAGTTCTGTTTTCCCGATGCCAAGGATTGGGTTCCTGTCCAGCAGTTCACCAGT
GAAACATTCTCATTTGTCTTAACTGGAGAAGATGGGAGCAGAAGGTTCGGTTACTGCCGAAGACTGCTGC
CTGGAGGCAAAGGGAAGCGCCTTCCTGAAGTTTACTGCATTGTGAGCCGCCTGGGATGCTTCAGCCTCTT
TTCAAGGATCTTGGATGAGGTGGAAAAAAGACGAGGCATCTCTCCTGCCCTGGTTCAGCCACTCATGAGA
AGTGTCATGGAAGCCCCTTTCCCAGCCCTGGGCAAAACCATCCTTGTCAAGAACTTCCTGCCAGGTTCAG
GAACTGAGGTGATCGAACTGTGCCGCCCGCTGGACTCCCGGCTCGAGCACGTGGACTTTGAGTCTCTCTT
CTCCTCCCTCAGCGTCCGCCACCTGGTCTGTGTGTTTGCCTCCCTGCTTCTGGAGAGGAGGGTCATCTTC
ATTGCAGACAAGCTCAGGTACCCGCCTTGGCTACTTCTGCTAAAGCGTTTGAATGACAGTCGCTCTTGGA
CCCTCTAG

Translation (795 aa):
MDMFSLDMIISDPAAEASRAGKKQLRGVQNPCPSARARPRHKSLNIKDKISEWEGKKEVPTPAPSRRADG
QEDYLPSSTVERRSSDGVRTQVTEAKNGMRPGTESTEKERNKGAVNVGGQDPEPGQDLSQPEREVDPSWG
RGREPRLGKLRFQNDPLSVLKQVKKLEQALKDGSAGLDPQLPGTCYSPHCPPDKAEAGSTLPENLGGGSG
SEVSQRVHPSDLEGREPTPELVEDRKGSCRRPWDRSLENVYRGSEGSPTKPFINPLPKPRRTFKHAGEGD
KDGKPGIGFRKEKRNLPPLPSLPPPPLPSSPPPSSVNRRLWTGRQKSSADHRKSYEFEDLLQSSSESSRV
DWYAQTKLGLTRTLSEENVYEDILDPPMKENPYEDIELHGRCLGKKCVLNFPASPTSSIPDTLTKQSLSK
PAFFRQNSERRNFKLLDTRKLSRDGTGSPSKISPPSTPSSPDDIFFNLGDPQNGRKKRKIPKLVLRINAI
YEVRRGKKRVKRLSQSMESNSGKVTDENSESDSDTEEKLKAHSQRLVNVKSRLKQAPRYPSLARELIEYQ
ERQLFEYFVVVSLHKKQAGAAYVPELTQQFPLKLERSFKFMREAEDQLKAIPQFCFPDAKDWVPVQQFTS
ETFSFVLTGEDGSRRFGYCRRLLPGGKGKRLPEVYCIVSRLGCFSLFSRILDEVEKRRGISPALVQPLMR
SVMEAPFPALGKTILVKNFLPGSGTEVIELCRPLDSRLEHVDFESLFSSLSVRHLVCVFASLLLERRVIF
IADKLRYPPWLLLLKRLNDSRSWTL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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