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Report for CCDS86141.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86141.1 Public Homo sapiens 10 DPCD 24 110 108 CCDS HistoryNCBI Gene:25911Re-query CCDS DB by CCDS ID:86141.1Re-query CCDS DB by GeneID:25911See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86141.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370147.5 ENSP00000359166.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000370147.5Link to Ensembl Protein Viewer:ENSP00000359166.1Re-query CCDS DB by Nucleotide ID:ENST00000370147Re-query CCDS DB by Protein ID:ENSP00000359166
Original member Current member EBI ENST00000626968.2 ENSP00000486078.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000626968.2Link to Ensembl Protein Viewer:ENSP00000486078.1Re-query CCDS DB by Nucleotide ID:ENST00000626968Re-query CCDS DB by Protein ID:ENSP00000486078
Original member Current member NCBI NM_001329744.2 NP_001316673.1 Accepted alive Link to Nucleotide Sequence:NM_001329744.2Link to Protein Sequence:NP_001316673.1Re-query CCDS DB by Nucleotide ID:NM_001329744Re-query CCDS DB by Protein ID:NP_001316673Link to BLAST:NP_001316673.1

Chromosomal Locations for CCDS 86141.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 101588337 101588400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 101594658 101594738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 101600738 101600862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 101601203 101601336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 101605140 101605212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 101608867 101608902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (513 nt):
ATGGCGGTGACGGGCTGGTTGGAGAGTCTGCGGACAGCCCAGAAGACTGCGCTGCTGCAGGACGGGAGAA
GGAAGGTTCACTATTTATTCCCAGACGGCAAGGAAATGGCTGAAGAATATGACGAGAAGACGAGTGAACT
ACTTGTGAGAAAGTGGCGTGTGAAAAGTGCCCTGGGAGCCATGGGCCAGTGGCAGCTTGAAGTAGGAGAC
CCAGCGCCCCTAGGAGCAGGGAACCTGGGGCCTGAACTCATCAAGGAAAGCAATGCCAATCCTATCTTCA
TGCGCAAGGACACCAAGATGAGTTTCCAGTGGCGGATTCGAAACCTCCCCTATCCTAAGGATGTCTATAG
TGTCTCTGTGGACCAGAAGGAGCGCTGCATCATTGTCAGAACAACCAACAAGAAGCGGACTGGTTGGAGG
CTTCTCTGGACCCCTCTGGCCATGCGGTGTGCAGGTGTGCATGGCACCCCCTCTGAGATAGACACCAGCT
ACCTCTGGATGACGCCTTGCTGA

Translation (170 aa):
MAVTGWLESLRTAQKTALLQDGRRKVHYLFPDGKEMAEEYDEKTSELLVRKWRVKSALGAMGQWQLEVGD
PAPLGAGNLGPELIKESNANPIFMRKDTKMSFQWRIRNLPYPKDVYSVSVDQKERCIIVRTTNKKRTGWR
LLWTPLAMRCAGVHGTPSEIDTSYLWMTPC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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