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Report for CCDS8719.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8719.1 Public Homo sapiens 12 IPO8 24 110 108 CCDS HistoryNCBI Gene:10526Re-query CCDS DB by CCDS ID:8719.1Re-query CCDS DB by GeneID:10526See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8719.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000256079.9 ENSP00000256079.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000256079.9Link to Ensembl Protein Viewer:ENSP00000256079.4Re-query CCDS DB by Nucleotide ID:ENST00000256079Re-query CCDS DB by Protein ID:ENSP00000256079
Original member Current member NCBI NM_006390.4 NP_006381.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006390.4Link to Protein Sequence:NP_006381.2Re-query CCDS DB by Nucleotide ID:NM_006390Re-query CCDS DB by Protein ID:NP_006381Link to BLAST:NP_006381.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006381.2 1037 O15397-1 1037 100% 0 0

Chromosomal Locations for CCDS 8719.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 30630860 30630957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30631895 30632011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30634083 30634286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30636982 30637187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30639515 30639735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30649137 30649232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30652192 30652289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30652967 30653092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30656684 30656750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30661141 30661266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30662327 30662487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30663489 30663654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30665220 30665309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30665729 30665845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30666175 30666251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30669183 30669282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30670962 30671096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30673990 30674074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30674659 30674753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30676498 30676587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30680482 30680638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30681659 30681817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30684301 30684457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30690496 30690577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 30695564 30695647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3114 nt):
ATGGACCTCAACCGGATCATCCAGGCGCTGAAGGGCACCATCGACCCGAAGTTGCGGATTGCAGCCGAGA
ACGAGCTCAACCAGTCCTACAAGATTATCAATTTTGCCCCCAGTTTACTTCGGATTATAGTCTCTGACCA
TGTGGAATTCCCAGTACGACAGGCAGCTGCCATTTACCTGAAGAACATGGTGACACAATACTGGCCAGAT
CGAGAACCTCCACCAGGAGAAGCAATATTTCCATTCAACATTCACGAAAACGATCGCCAGCAAATACGTG
ATAACATTGTGGAAGGAATAATTCGGTCTCCAGATTTAGTGAGAGTCCAATTAACAATGTGTCTCCGTGC
CATCATAAAACATGATTTTCCTGGTCACTGGCCAGGAGTGGTCGACAAGATAGACTATTACTTGCAATCA
CAGAGCAGTGCAAGCTGGCTTGGCAGTTTATTATGCCTGTATCAACTGGTGAAGACATATGAATATAAGA
AAGCAGAAGAGAGAGAACCTCTTATAATAGCAATGCAGATATTCCTGCCTCGTATTCAGCAACAAATTGT
TCAGCTCCTTCCTGATTCCTCCTATTATTCTGTATTACTGCAGAAACAAATTCTGAAAATCTTTTATGCA
CTTGTTCAGTATGCATTGCCTCTTCAGCTAGTGAATAACCAAACCATGACAACATGGATGGAGATCTTCC
GAACTATTATCGACAGGACCGTTCCTCCTGAGACTCTGCACATTGATGAGGATGATAGACCAGAACTGGT
ATGGTGGAAGTGTAAGAAGTGGGCACTGCATATTGTAGCTCGGCTCTTTGAACGATATGGAAGCCCAGGA
AATGTCACAAAAGAATACTTTGAATTTTCTGAATTCTTTTTGAAAACCTATGCAGTGGGCATTCAGCAGG
TGCTACTAAAAATTTTAGATCAATATAGACAGAAAGAATATGTAGCTCCCCGTGTTCTTCAGCAAGCATT
CAACTATCTCAACCAAGGGGTGGTTCATTCTATAACCTGGAAGCAGATGAAGCCACACATACAGAATATC
TCTGAAGATGTGATTTTTTCTGTGATGTGTTATAAAGATGAGGATGAAGAGCTGTGGCAAGAAGATCCAT
ATGAGTATATAAGGATGAAATTTGATATTTTTGAAGATTATGCTTCTCCCACCACAGCAGCCCAGACTCT
CTTATATACTGCTGCAAAGAAAAGAAAAGAGGTGTTGCCAAAAATGATGGCATTCTGTTATCAAATCCTG
ACAGACCCGAACTTTGACCCTAGGAAGAAAGATGGAGCCCTGCATGTGATTGGTTCCCTAGCTGAGATTT
TACTGAAGAAGAGTTTATTCAAGGACCAAATGGAGCTGTTTCTACAAAATCATGTATTTCCATTATTATT
GTCTAACCTGGGATATCTTCGAGCTAGATCTTGCTGGGTACTTCATGCATTTAGTTCTTTGAAGTTCCAT
AATGAGCTCAATCTAAGAAATGCCGTTGAATTAGCGAAGAAGAGCCTGATTGAAGATAAAGAGATGCCTG
TCAAAGTTGAAGCTGCCCTTGCTCTTCAGTCTTTAATTTCTAACCAGATACAAGCTAAGGAATATATGAA
GCCACATGTGAGGCCTATTATGCAGGAACTGTTGCACATTGTTAGAGAGACAGAAAATGATGATGTTACT
AATGTCATCCAGAAGATGATATGTGAATACAGTCAAGAGGTAGCCTCAATTGCTGTTGATATGACCCAAC
ACTTGGCTGAGATATTTGGCAAAGTTCTTCAAAGTGATGAATATGAAGAAGTTGAAGACAAAACAGTAAT
GGCTATGGGAATTTTACATACCATTGATACTATCTTAACAGTTGTAGAAGATCATAAAGAGATTACCCAG
CAGTTAGAGAATATCTGTCTACGGATCATTGATCTTGTTCTGCAGAAACATGTAATTGAATTCTATGAAG
AAATTCTTTCCCTGGCATACAGTTTAACCTGCCACAGTATTTCCCCTCAAATGTGGCAGCTTCTAGGTAT
ACTATATGAAGTGTTTCAGCAGGATTGCTTTGAATACTTTACAGACATGATGCCTCTCCTGCATAATTAT
GTGACAATAGATACAGATACCTTACTATCAAATGCAAAACATTTAGAAATTCTTTTTACAATGTGTAGGA
AGGTACTATGTGGAGATGCAGGAGAAGATGCAGAGTGTCATGCAGCTAAACTTCTGGAAGTCATCATTCT
TCAGTGCAAAGGAAGGGGAATTGATCAGTGCATTCCACTCTTCGTTCAACTTGTTTTGGAGAGATTAACT
CGAGGGGTCAAAACTAGTGAGCTTCGTACTATGTGTCTTCAGGTTGCAATTGCTGCCTTGTACTACAACC
CTGATTTGCTGCTACATACTTTAGAACGAATTCAGTTGCCTCACAACCCTGGACCTATCACTGTACAGTT
TATAAATCAATGGATGAATGATACAGATTGTTTTCTTGGGCATCATGACCGGAAGATGTGTATAATAGGA
CTGAGTATCCTTTTGGAATTGCAAAATCGACCTCCTGCAGTAGATGCTGTGGTGGGACAGATTGTTCCCT
CAATTCTTTTCCTTTTCCTTGGCCTAAAGCAGGTCTGTGCTACTAGACAACTGGTAAACCGGGAAGATCG
TTCAAAAGCAGAGAAAGCTGATATGGAAGAAAATGAGGAGATTTCAAGTGATGAAGAGGAGACAAATGTA
ACTGCTCAAGCAATGCAGTCAAATAATGGAAGAGGTGAAGATGAGGAGGAGGAAGATGATGACTGGGATG
AAGAAGTATTGGAAGAAACCGCGCTTGAGGGGTTCAGTACTCCACTTGACCTTGACAATAGTGTGGATGA
ATATCAGTTTTTTACACAAGCTCTGATAACTGTGCAGAGTCGAGATGCAGCCTGGTACCAGCTGCTGATG
GCACCACTCAGCGAGGATCAGAGGACAGCACTGCAGGAGGTGTACACACTGGCAGAGCACCGACGGACGG
TGGCAGAGGCAAAGAAGAAGATTGAACAACAGGGAGGCTTCACCTTTGAAAACAAAGGAGTCCTCTCCGC
ATTTAATTTTGGGACTGTGCCCAGCAACAACTGA

Translation (1037 aa):
MDLNRIIQALKGTIDPKLRIAAENELNQSYKIINFAPSLLRIIVSDHVEFPVRQAAAIYLKNMVTQYWPD
REPPPGEAIFPFNIHENDRQQIRDNIVEGIIRSPDLVRVQLTMCLRAIIKHDFPGHWPGVVDKIDYYLQS
QSSASWLGSLLCLYQLVKTYEYKKAEEREPLIIAMQIFLPRIQQQIVQLLPDSSYYSVLLQKQILKIFYA
LVQYALPLQLVNNQTMTTWMEIFRTIIDRTVPPETLHIDEDDRPELVWWKCKKWALHIVARLFERYGSPG
NVTKEYFEFSEFFLKTYAVGIQQVLLKILDQYRQKEYVAPRVLQQAFNYLNQGVVHSITWKQMKPHIQNI
SEDVIFSVMCYKDEDEELWQEDPYEYIRMKFDIFEDYASPTTAAQTLLYTAAKKRKEVLPKMMAFCYQIL
TDPNFDPRKKDGALHVIGSLAEILLKKSLFKDQMELFLQNHVFPLLLSNLGYLRARSCWVLHAFSSLKFH
NELNLRNAVELAKKSLIEDKEMPVKVEAALALQSLISNQIQAKEYMKPHVRPIMQELLHIVRETENDDVT
NVIQKMICEYSQEVASIAVDMTQHLAEIFGKVLQSDEYEEVEDKTVMAMGILHTIDTILTVVEDHKEITQ
QLENICLRIIDLVLQKHVIEFYEEILSLAYSLTCHSISPQMWQLLGILYEVFQQDCFEYFTDMMPLLHNY
VTIDTDTLLSNAKHLEILFTMCRKVLCGDAGEDAECHAAKLLEVIILQCKGRGIDQCIPLFVQLVLERLT
RGVKTSELRTMCLQVAIAALYYNPDLLLHTLERIQLPHNPGPITVQFINQWMNDTDCFLGHHDRKMCIIG
LSILLELQNRPPAVDAVVGQIVPSILFLFLGLKQVCATRQLVNREDRSKAEKADMEENEEISSDEEETNV
TAQAMQSNNGRGEDEEEEDDDWDEEVLEETALEGFSTPLDLDNSVDEYQFFTQALITVQSRDAAWYQLLM
APLSEDQRTALQEVYTLAEHRRTVAEAKKKIEQQGGFTFENKGVLSAFNFGTVPSNN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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