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Report for CCDS87766.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87766.1 Public Homo sapiens X FAM236A 24 110 108 CCDS HistoryNCBI Gene:100129407Re-query CCDS DB by CCDS ID:87766.1Re-query CCDS DB by GeneID:100129407See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87766.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000593662.1 ENSP00000490197.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000593662.1Link to Ensembl Protein Viewer:ENSP00000490197.1Re-query CCDS DB by Nucleotide ID:ENST00000593662Re-query CCDS DB by Protein ID:ENSP00000490197
Original member Current member NCBI NM_001348071.2 NP_001335000.1 Accepted alive Link to Nucleotide Sequence:NM_001348071.2Link to Protein Sequence:NP_001335000.1Re-query CCDS DB by Nucleotide ID:NM_001348071Re-query CCDS DB by Protein ID:NP_001335000Link to BLAST:NP_001335000.1

Chromosomal Locations for CCDS 87766.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 72938263 72938298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 72938488 72938651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 72938806 72938833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (228 nt):
ATGATCTTCACTCCCTTCCTTCCACCTGCTGACCTGAATGTGAAAGGGCTGCAAAACGACCCTGAGGAAT
GGGTGGCTGTGTCTGACGCCACGGAGGACCCATCCGGTGGCACAGGCTTGCCCAGGGAACCTGCTCTTCT
GCGAGGGTCTTGGAGGAGCCGGTTCCAGAGAGCCCTGGCATGTTTCACCAAGTGTTTCAGGGGAGGATAC
CGGGCACTCGGAATCTGA

Translation (75 aa):
MIFTPFLPPADLNVKGLQNDPEEWVAVSDATEDPSGGTGLPREPALLRGSWRSRFQRALACFTKCFRGGY
RALGI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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