NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS91433.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91433.1 Public Homo sapiens 11 TRIM66 24 110 108 CCDS HistoryNCBI Gene:9866Re-query CCDS DB by CCDS ID:91433.1Re-query CCDS DB by GeneID:9866See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91433.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000705689.1 ENSP00000516162.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000705689.1Link to Ensembl Protein Viewer:ENSP00000516162.1Re-query CCDS DB by Nucleotide ID:ENST00000705689Re-query CCDS DB by Protein ID:ENSP00000516162
Original member Current member NCBI NM_001388023.1 NP_001374952.1 Accepted alive Link to Nucleotide Sequence:NM_001388023.1Link to Protein Sequence:NP_001374952.1Re-query CCDS DB by Nucleotide ID:NM_001388023Re-query CCDS DB by Protein ID:NP_001374952Link to BLAST:NP_001374952.1

Chromosomal Locations for CCDS 91433.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 8617944 8618003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8618750 8618968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8619383 8619535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8620050 8620124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8620446 8620572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8621032 8621321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8621645 8621819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8622816 8622876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8624359 8624551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8624713 8625228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8638654 8638815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8640227 8641152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8643009 8643126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8645741 8645887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8646447 8646561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8647970 8648086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8648416 8648548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8649740 8649887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8651800 8651903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8671897 8672098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8672248 8672274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4068 nt):
ATGGCTAGACTCTCTTTTTGGTCCCAGGGAGTGGAGCTGGCTCGCTCTACACGCTGCTTCTCACCTGAGG
ATATCAGTGGAAAAGCCCCAGTCCTGGGCACAGGCATGGCTGTGGACATGGGCATGAGCTTTATGGGGCT
GCCACTAGCTGGCCAGAAACACTGCCCTAAGAGTGGACAGATGGAGGCCATGGTAATGACCTGCTCATTG
TGCCATCAGGACCTGCCAGAGCTCATCTCCTGTCCTGGGTGTGAACGAGTATATCTTACCAGGGATGTAA
CTGAACATTTTTTTCTGCATTGTGTTCCTACTGAGCAACCCAAGATGGCCAGGAACTGCTCTGAGTGCAA
GGAGAAGAGGGCAGCACATATCCTCTGCACCTACTGCAATCGCTGGCTGTGCAGCTCTTGCACAGAGGAA
CACCGACACAGCCCTGTCCCCGGGGGCCCATTCTTTCCTCGGGCCCAGAAGGGATCTCCAGGAGTGAATG
GTGGTCCCGGAGACTTCACCTTGTATTGTCCTCTACACACACAGGAAGTACTCAAGCTATTCTGTGAGAC
ATGTGATATGCTCACTTGCCATAGCTGCCTAGTGGTGGAACACAAAGAACACAGGTGCAGACATGTTGAA
GAAGTTTTGCAAAACCAGAGGATGCTTCTGGAAGGTGTGACTACACAGGTGGCACATAAGAAATCCAGTC
TACAGACATCTGCAAAGCAAATTGAGGACAGGATTTTTGAAGTGAAGCATCAGCATAGGAAGGTGGAAAA
CCAGATCAAAATGGCCAAGATGGTTCTGATGAATGAGCTGAACAAACAGGCCAATGGGCTAATAGAGGAA
TTAGAGGGGATTACTAATGAGAGAAAGCGGAAGCTGGAACAGCAGTTACAGAGCATCATGGTTCTCAACC
GTCAGTTTGAGCATGTGCAGAATTTCATCAACTGGGCTGTCTGCAGCAAAACCAGTGTCCCTTTTCTTTT
CAGCAAAGAGCTGATTGTGTTTCAGATGCAGCGATTGCTGGAGACAAGTTGTAACACAGATCCTGGCTCC
CCTTGGAGTATCAGATTCACCTGGGAGCCTAACTTCTGGACCAAGCAGCTAGCTTCTCTTGGCTGCATAA
CTACTGAAGGTGGACAAATGTCCAGGGCAGATGCTCCTGCTTATGGAGGCTTACAGGGGTCATCACCCTT
TTATCAAAGCCACCAGTCTCCAGTGGCTCAGCAAGAGGCTCTTAGCCACCCCTCACACAAGTTCCAGTCT
CCAGCAGTGTGCTCCTCATCTGTGTGCTGCTCCCACTGCTCCCCAGTCTCGCCTTCCCTCAAAGGCCAGG
TCCCCCCACCCAGCATACACCCAGCCCACAGCTTCAGGCAGCCCCCTGAGATGGTGCCCCAGCAGCTGGG
GTCTCTGCAGTGCTCTGCCCTGCTGCCCAGGGAGAAAGAGCTGGCCTGCAGCCCTCATCCACCAAAGCTG
CTGCAGCCCTGGCTGGAAACCCAGCCCCCCGTGGAGCAGGAGAGCACATCCCAGCGGCTGGGGCAGCAGC
TGACTTCCCAGCCCGTGTGCATTGTCCCCCCACAGGATGTTCAGCAAGGAGCCCATGCCCAGCCCACCTT
ACAGACACCCTCTATCCAAGTCCAGTTTGGCCACCACCAGAAGCTGAAGCTCAGTCACTTTCAGCAGCAG
CCACAGCAGCAGCTACCACCTCCACCACCACCCCTCCCCCATCCCCCACCTCCCCTTCCCCCTCCCCCAC
AGCAGCCACACCCACCTCTTCCTCCATCCCAGCATCTGGCTTCTAGTCAGCACGAGAGCCCTCCTGGCCC
TGCCTGTTCTCAGAACATGGACATAATGCATCACAAGTTTGAGCTGGAGGAAATGCAGAAGGACTTGGAG
CTTCTTCTCCAGGCTCAACAGCCCAGCCTGCAACTGAGTCAGACCAAATCTCCTCAGCATCTTCAGCAAA
CCATTGTGGGGCAGATCAACTACATCGTGAGGCAGCCAGCACCTGTCCAGTCCCAGAGCCAGGAGGAGAC
CCTGCAGGCTACAGATGAGCCCCCAGCATCTCAGGGCTCAAAGCCGGCTCTCCCTCTTGACAAGAATACT
GCTGCTGCCTTGCCCCAGGCGTCTGGGGAAGAAACCCCTCTCAGTGTCCCCCCAGTGGACAGCACCATCC
AGCACTCCTCTCCAAATGTGGTGAGAAAGCACTCCACCTCGCTGAGCATCATGGGCTTTTCCAACACTCT
GGAGATGGAGTTGTCATCTACCAGGTTGGAGAGGCCCCTAGAGCCACAGATCCAGAGTGTGAGCAACCTG
ACAGCTGGTGCCCCCCAGGCAGTACCAAGCCTGCTGAGTGCTCCCCCCAAAATGGTGTCCAGCCTGACAA
GTGTTCAAAACCAGGCCATGCCCAGCCTGACAACCAGTCACCTACAGACTGTGCCCAGCCTTGTGCATAG
CACATTCCAGTCCATGCCCAACCTGATAAGTGACTCCCCTCAGGCTATGGCAAGCCTGGCAAGTGATCAC
CCTCAGGCTGGGCCCAGCCTAATGTCTGGTCACACCCAGGCTGTGCCGAGTCTGGCAACTTGTCCTCTGC
AGAGCATCCCTCCAGTTTCTGACATGCAGCCAGAAACTGGGTCCAGCTCCAGTTCTGGCCGAACTTCAGG
GAGCCTGTGTCCCAGAGATGGGGCTGATCCCTCCCTGGAGAATGCTCTGTGTAAGATGGAAAGTGAGGAT
TCCACTCGCTTCACTGACTTACTGGGACAAGGTCCCATAGTCCCCGGTCTGGATGCTCCCAAGGACTTGG
CCATCCCCTCAGAACTGGAGGAGCCAATTAACCTCTCTGTGAAGAAACCTCCACTGGCGCCAGTGGTCAG
CACGTCTACAGCTCTGCAGCAGTACCAGAACCCAAAAGAGTGTGAGAATTTTGAACAAGGAGCCCTAGAG
CTGGATGCAAAAGAGAACCAGAGCATCAGAGCCTTCAATAGTGAGCATAAGATTCCCTATGTGCGACTGG
AGCGACTCAAGATCTGTGCTGCCTCCTCAGGAGAGATGCCTGTGTTCAAACTGAAGCCACAGAAGAATGA
TCAGGATGGGAGCTTCCTGCTGATCATCGAGTGTGGCACTGAGTCCTCCAGCATGTCCATTAAGGTCAGC
CAGGACAGACTGTCTGAGGCCACCCAGGCCCCAGGTCTGGAGGGAAGAAAGGTCACTGTCACTTCTTTGG
CTGGGCAGCGGCCACCAGAAGTGGAGGGCACATCTCCTGAAGAACACAGACTCATTCCTCGAACCCCAGG
AGCCAAGAAGGGCCCCCCAGCCCCAATAGAGAATGAGGACTTCTGTGCTGTTTGCCTCAATGGCGGAGAG
TTACTGTGCTGTGACCGCTGCCCCAAAGTGTTCCACCTCTCCTGCCATGTGCCAGCCTTGCTCAGCTTCC
CAGGGGGAGAGTGGGTGTGTACCTTGTGCCGCAGCCTGACCCAGCCCGAGATGGAGTACGACTGTGAGAA
TGCCTGCTATAACCAGCCTGGAATGCGGGCATCTCCTGGCCTAAGCATGTATGACCAGAAGAAGTGTGAG
AAGCTGGTATTGTCCTTGTGCTGCAATAACCTCAGCCTGCCCTTCCATGAACCTGTCAGCCCCCTGGCCC
GGCATTATTACCAGATTATCAAGAGGCCCATGGACCTGTCAATCATCCGGAGGAAGCTGCAAAAGAAGGA
CCCAGCTCACTATACCACCCCAGAGGAGGTGGTATCAGATGTGCGCCTCATGTTCTGGAACTGTGCTAAG
TTCAATTATCCTGACTCCGAGGTTGCAGAGGCTGGCCGCTGCCTGGAAGTGTTCTTTGAGGGCTGGTTGA
AGGAGATCTACCCGGAGAAACGGTTTGCCCAGCCAAGGCAGGAGGACTCAGACTCCGAGGAGGTGTCTAG
TGAGAGTGGATGTTCCACTCCCCAGGGCTTCCCGTGGCCTCCCTACATGCAGGAGGGCATCCAACCCAAG
AGGCGGCGACGACATATGGAGAATGAAAGAGCAAAAAGAATGTCATTTCGCCTGGCCAACAGCATCTCTC
AGGTGTGA

Translation (1355 aa):
MARLSFWSQGVELARSTRCFSPEDISGKAPVLGTGMAVDMGMSFMGLPLAGQKHCPKSGQMEAMVMTCSL
CHQDLPELISCPGCERVYLTRDVTEHFFLHCVPTEQPKMARNCSECKEKRAAHILCTYCNRWLCSSCTEE
HRHSPVPGGPFFPRAQKGSPGVNGGPGDFTLYCPLHTQEVLKLFCETCDMLTCHSCLVVEHKEHRCRHVE
EVLQNQRMLLEGVTTQVAHKKSSLQTSAKQIEDRIFEVKHQHRKVENQIKMAKMVLMNELNKQANGLIEE
LEGITNERKRKLEQQLQSIMVLNRQFEHVQNFINWAVCSKTSVPFLFSKELIVFQMQRLLETSCNTDPGS
PWSIRFTWEPNFWTKQLASLGCITTEGGQMSRADAPAYGGLQGSSPFYQSHQSPVAQQEALSHPSHKFQS
PAVCSSSVCCSHCSPVSPSLKGQVPPPSIHPAHSFRQPPEMVPQQLGSLQCSALLPREKELACSPHPPKL
LQPWLETQPPVEQESTSQRLGQQLTSQPVCIVPPQDVQQGAHAQPTLQTPSIQVQFGHHQKLKLSHFQQQ
PQQQLPPPPPPLPHPPPPLPPPPQQPHPPLPPSQHLASSQHESPPGPACSQNMDIMHHKFELEEMQKDLE
LLLQAQQPSLQLSQTKSPQHLQQTIVGQINYIVRQPAPVQSQSQEETLQATDEPPASQGSKPALPLDKNT
AAALPQASGEETPLSVPPVDSTIQHSSPNVVRKHSTSLSIMGFSNTLEMELSSTRLERPLEPQIQSVSNL
TAGAPQAVPSLLSAPPKMVSSLTSVQNQAMPSLTTSHLQTVPSLVHSTFQSMPNLISDSPQAMASLASDH
PQAGPSLMSGHTQAVPSLATCPLQSIPPVSDMQPETGSSSSSGRTSGSLCPRDGADPSLENALCKMESED
STRFTDLLGQGPIVPGLDAPKDLAIPSELEEPINLSVKKPPLAPVVSTSTALQQYQNPKECENFEQGALE
LDAKENQSIRAFNSEHKIPYVRLERLKICAASSGEMPVFKLKPQKNDQDGSFLLIIECGTESSSMSIKVS
QDRLSEATQAPGLEGRKVTVTSLAGQRPPEVEGTSPEEHRLIPRTPGAKKGPPAPIENEDFCAVCLNGGE
LLCCDRCPKVFHLSCHVPALLSFPGGEWVCTLCRSLTQPEMEYDCENACYNQPGMRASPGLSMYDQKKCE
KLVLSLCCNNLSLPFHEPVSPLARHYYQIIKRPMDLSIIRRKLQKKDPAHYTTPEEVVSDVRLMFWNCAK
FNYPDSEVAEAGRCLEVFFEGWLKEIYPEKRFAQPRQEDSDSEEVSSESGCSTPQGFPWPPYMQEGIQPK
RRRRHMENERAKRMSFRLANSISQV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH