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Report for CCDS91922.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91922.1 Public Homo sapiens 14 CCDC197 24 110 108 CCDS HistoryNCBI Gene:256369Re-query CCDS DB by CCDS ID:91922.1Re-query CCDS DB by GeneID:256369See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 91922.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000640978.1 ENSP00000491594.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000640978.1Link to Ensembl Protein Viewer:ENSP00000491594.1Re-query CCDS DB by Nucleotide ID:ENST00000640978Re-query CCDS DB by Protein ID:ENSP00000491594
Current member NCBI NM_001411045.1 NP_001397974.1 Accepted alive Link to Nucleotide Sequence:NM_001411045.1Link to Protein Sequence:NP_001397974.1Re-query CCDS DB by Nucleotide ID:NM_001411045Re-query CCDS DB by Protein ID:NP_001397974Link to BLAST:NP_001397974.1

Chromosomal Locations for CCDS 91922.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 93998132 93998235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 93999583 93999665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94001145 94001323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94003223 94003354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94004855 94004971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94007011 94007064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (669 nt):
ATGGCAGCCATGGACACAGGCCAGAGAGCTGACCCAAGCAATCCTGGTGACAAGGAAGGGGACCTTCAAG
GGCTGTGGCAGGAACTCTACCAGCTCCAGGCTAAGCAGAAGAAGCTCAAGAGAGAAGTCGAGAAGCACAA
GCTTTTTGAAGACTATCTGATTAAGGTCCTTGAGAAAATCCCCGAGGGCTGCACGGGATGGGAGGAGCCG
GAGGAGGTGCTGGTGGAGGCCACGGTGAAGCACTACGGGAAGCTCTTCACAGCCAGCCAGGACACGCAGA
AGCGCCTCGAGGCCTTCTGCCAGATGATCCAGGCTGTCCACCGGAGCCTGGAGTCTCTGGAGGAGGACCA
CAGGGCTCTCATGTTGAGCCTCAAGATCCGGCTGTGTCAGCTGCAGAAGAAGTGCTACCGCAAGCAGGAG
CAGTGGTGGCAGCTGAAGCACAGCATCACTTACCAGAAGGACATTGACTTTGACACACACACCAGCAGCA
GCTATAATGATCAGCTGCTCGGCTACATGCAAATGACCATCACCAACATGGCCCGGCAGTGCTGCCCCTC
TGCCCACGGCGTGCCCAAGAGCATGGATCTCTTCTCCAAGCTCGATCTGATTAAGAGACAGGGTTTCACC
AAGTTGGCCAGGCTGGTCTTCAACTCTGACCTCAAGTGA

Translation (222 aa):
MAAMDTGQRADPSNPGDKEGDLQGLWQELYQLQAKQKKLKREVEKHKLFEDYLIKVLEKIPEGCTGWEEP
EEVLVEATVKHYGKLFTASQDTQKRLEAFCQMIQAVHRSLESLEEDHRALMLSLKIRLCQLQKKCYRKQE
QWWQLKHSITYQKDIDFDTHTSSSYNDQLLGYMQMTITNMARQCCPSAHGVPKSMDLFSKLDLIKRQGFT
KLARLVFNSDLK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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