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Report for CCDS91990.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91990.1 Public Homo sapiens 15 FRMD5 24 110 108 CCDS HistoryNCBI Gene:84978Re-query CCDS DB by CCDS ID:91990.1Re-query CCDS DB by GeneID:84978See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91990.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000402883.5 ENSP00000384142.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000402883.5Link to Ensembl Protein Viewer:ENSP00000384142.1Re-query CCDS DB by Nucleotide ID:ENST00000402883Re-query CCDS DB by Protein ID:ENSP00000384142
Current member NCBI NM_001411124.1 NP_001398053.1 Accepted alive Link to Nucleotide Sequence:NM_001411124.1Link to Protein Sequence:NP_001398053.1Re-query CCDS DB by Nucleotide ID:NM_001411124Re-query CCDS DB by Protein ID:NP_001398053Link to BLAST:NP_001398053.1

Chromosomal Locations for CCDS 91990.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 43873148 43873222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43874119 43874462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43883703 43883809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43884727 43884795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43885681 43885755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43888175 43888266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43888809 43888872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43891981 43892069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43902175 43902262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43905828 43905951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43909882 43909979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43919459 43919537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43919767 43919809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43924205 43924309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 44194953 44195054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1554 nt):
ATGCTGAGCAGGTTGATGAGCGGCAGCAGCAGGAGCCTGGAGCGCGAGTACAGCTGCACCGTGCGGCTGC
TGGACGACAGCGAGTACACCTGCACCATCCAGAGAGATGCCAAAGGCCAGTACCTGTTTGACCTTCTTTG
CCACCATCTGAACCTACTTGAGAAAGACTATTTTGGTATCCGCTTTGTAGACCCAGATAAGCAGCGGCAT
TGGCTGGAATTTACAAAGTCTGTGGTGAAACAATTGAGATCCCAGCCTCCATTCACCATGTGCTTCCGTG
TGAAGTTTTATCCTGCAGACCCTGCTGCTCTGAAAGAAGAAATAACCAGGTATTTAGTCTTCCTGCAGAT
CAAAAGGGATCTCTACCATGGCCGACTCCTCTGTAAAACATCGGATGCTGCCTTGTTAGCAGCTTACATC
CTTCAAGCGGAGATTGGGGATTATGACTCAGGGAAACACCCTGAAGGCTACAGCTCCAAGTTCCAGTTTT
TCCCTAAACATTCAGAGAAGCTGGAAAGGAAAATTGCTGAGATTCACAAGACGGAACTGAGTGGTCAAAC
ACCAGCAACATCAGAGCTGAACTTCTTAAGAAAAGCACAGACATTGGAAACATATGGAGTGGATCCTCAC
CCATGTAAGGACGTGTCAGGAAATGCTGCATTTCTGGCCTTCACTCCTTTTGGGTTTGTTGTTCTTCAAG
GAAACAAGAGGGTCCACTTCATTAAATGGAATGAGGTGACCAAGCTGAAATTTGAAGGAAAGACTTTCTA
TTTATACGTAAGTCAGAAAGAGGAAAAGAAAATTATTCTTACATATTTTGCTCCAACTCCTGAAGCGTGT
AAGCACCTCTGGAAATGTGGAATCGAGAACCAAGCCTTCTACAAGCTGGAGAAGTCAAGCCAAGTCCGCA
CAGTGTCCAGCAGCAATTTATTCTTTAAAGGGAGCCGGTTCCGATACAGTGGCCGAGTTGCAAAGGAAGT
CATGGAATCAAGTGCTAAGATCAAACGGGAGCCACCGGAAATACACAGAGCAGGGATGGTTCCCAGCCGG
AGCTGTCCCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTCCCCAGGACCCGCAGAAGAGCTGTTCACA
TCTCCATCATGGAAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCGTTCCACTTCCCA
TGGGGACACCTTCCTGCCTCACGTGAGAAGCAGCCGGACAGATAGCAATGAGCGAGTAGCTGTGATTGCA
GACGAGGCCTACAGCCCTGCAGACAGCGTGCTGCCCACCCCTGTGGCTGAGCACAGCCTGGAGCTGATGT
TGCTTTCCCGGCAGATCAATGGAGCCACCTGCAGCATTGAGGAGGAGAAGGAATCTGAAGCCAGCACCCC
AACTGCTACAGAGGTGGAGGCCCTTGGGGGAGAGCTGAGGGCCCTGTGTCAGGGGCACAGCGGGCCCGAG
GAGGAACAGAGTGGGCATCTGAAGGGACCACCGCTACAGCAACAGCAGCATCAGGGGTGGGGTAAGTCTG
TCCCCTTAGTCTAG

Translation (517 aa):
MLSRLMSGSSRSLEREYSCTVRLLDDSEYTCTIQRDAKGQYLFDLLCHHLNLLEKDYFGIRFVDPDKQRH
WLEFTKSVVKQLRSQPPFTMCFRVKFYPADPAALKEEITRYLVFLQIKRDLYHGRLLCKTSDAALLAAYI
LQAEIGDYDSGKHPEGYSSKFQFFPKHSEKLERKIAEIHKTELSGQTPATSELNFLRKAQTLETYGVDPH
PCKDVSGNAAFLAFTPFGFVVLQGNKRVHFIKWNEVTKLKFEGKTFYLYVSQKEEKKIILTYFAPTPEAC
KHLWKCGIENQAFYKLEKSSQVRTVSSSNLFFKGSRFRYSGRVAKEVMESSAKIKREPPEIHRAGMVPSR
SCPSITHGPRLSSVPRTRRRAVHISIMEGLESLRDSAHSTPVRSTSHGDTFLPHVRSSRTDSNERVAVIA
DEAYSPADSVLPTPVAEHSLELMLLSRQINGATCSIEEEKESEASTPTATEVEALGGELRALCQGHSGPE
EEQSGHLKGPPLQQQQHQGWGKSVPLV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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