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Report for CCDS92247.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92247.1 Public Homo sapiens 17 KCTD11 24 110 108 CCDS HistoryNCBI Gene:147040Re-query CCDS DB by CCDS ID:92247.1Re-query CCDS DB by GeneID:147040See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)


Attributes
Non-AUG initiation codon

Sequence IDs included in CCDS 92247.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000333751.8 ENSP00000328352.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000333751.8Link to Ensembl Protein Viewer:ENSP00000328352.5Re-query CCDS DB by Nucleotide ID:ENST00000333751Re-query CCDS DB by Protein ID:ENSP00000328352
Original member Current member NCBI NM_001363642.1 NP_001350571.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001363642.1Link to Protein Sequence:NP_001350571.1Re-query CCDS DB by Nucleotide ID:NM_001363642Re-query CCDS DB by Protein ID:NP_001350571Link to BLAST:NP_001350571.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001350571.1 271 Q693B1-2 271 100% 0 0

Chromosomal Locations for CCDS 92247.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 7352826 7353641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. This works on the replacement symbol in the Translation Exceptions section also.

Translation Exceptions:
replace the symbol I (codon ATT) with M at amino acid position 1

Nucleotide Sequence (816 nt):
ATTTCTCCTCCTCCTGTGCCCTCTTCGCCCCCCTCCTTTGGGGGCCCCGTGACCCTGAATGTGGGGGGCA
CACTATATTCCACCACTTTGGAGACCCTGACCCGCTTCCCAGACTCTATGCTGGGGGCCATGTTTAGGGC
CGGCACCCCCATGCCCCCCAACCTCAATTCCCAAGGAGGCGGCCACTACTTCATCGACCGGGATGGCAAG
GCCTTCCGGCACATCCTCAATTTCCTGAGGCTGGGCCGCCTGGACCTGCCCCGTGGGTACGGAGAGACAG
CGCTGCTCAGGGCAGAGGCTGACTTCTACCAGATCCGGCCCCTCCTGGACGCGCTGCGGGAACTGGAGGC
CTCTCAGGGGACCCCTGCACCCACAGCTGCCCTGCTCCACGCAGATGTAGATGTCAGCCCCCGCCTGGTG
CACTTCTCTGCTCGCCGGGGACCCCATCACTATGAGCTGAGCTCCGTCCAGGTGGACACCTTCCGAGCCA
ACCTTTTCTGCACCGACTCTGAGTGTCTAGGTGCTTTGCGGGCCCGATTTGGTGTGGCCAGTGGGGATAG
GGCAGAGGGGAGCCCACATTTTCATCTGGAGTGGGCCCCCCGCCCCGTGGAACTCCCCGAGGTGGAGTAT
GGGAGACTGGGGCTGCAGCCGCTGTGGACTGGGGGGCCAGGAGAGCGGCGGGAGGTGGTGGGCACCCCAA
GCTTCCTGGAGGAGGTGCTGCGGGTGGCTCTCGAGCACGGCTTCCGACTAGACTCTGTCTTCCCCGACCC
CGAAGACCTGCTCAACTCCAGGTCTCTGCGCTTTGTCCGGCACTGA

Translation (271 aa):
MSPPPVPSSPPSFGGPVTLNVGGTLYSTTLETLTRFPDSMLGAMFRAGTPMPPNLNSQGGGHYFIDRDGK
AFRHILNFLRLGRLDLPRGYGETALLRAEADFYQIRPLLDALRELEASQGTPAPTAALLHADVDVSPRLV
HFSARRGPHHYELSSVQVDTFRANLFCTDSECLGALRARFGVASGDRAEGSPHFHLEWAPRPVELPEVEY
GRLGLQPLWTGGPGERREVVGTPSFLEEVLRVALEHGFRLDSVFPDPEDLLNSRSLRFVRH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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