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Report for CCDS93162.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93162.1 Public Homo sapiens 22 MICALL1 24 110 108 CCDS HistoryNCBI Gene:85377Re-query CCDS DB by CCDS ID:93162.1Re-query CCDS DB by GeneID:85377See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93162.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000445494.6 ENSP00000404543.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000445494.6Link to Ensembl Protein Viewer:ENSP00000404543.2Re-query CCDS DB by Nucleotide ID:ENST00000445494Re-query CCDS DB by Protein ID:ENSP00000404543
Current member NCBI NM_001410820.1 NP_001397749.1 Accepted alive Link to Nucleotide Sequence:NM_001410820.1Link to Protein Sequence:NP_001397749.1Re-query CCDS DB by Nucleotide ID:NM_001410820Re-query CCDS DB by Protein ID:NP_001397749Link to BLAST:NP_001397749.1

Chromosomal Locations for CCDS 93162.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 37906423 37906568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37911952 37912000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37912351 37912492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37917707 37917795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37919036 37919178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37921972 37922426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37924660 37924717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37925661 37926043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37927411 37927820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37931799 37931933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37932553 37932679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37932798 37932888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37933039 37933112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37937080 37937194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37937746 37937792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37940709 37940830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2586 nt):
ATGGCTGGGCCGCGGGGCGCGCTGCTGGCCTGGTGCCGCCGCCAGTGCGAGGGCTACCGCGGCGTGGAGA
TCCGCGACCTGAGCAGCTCCTTCCGGGACGGCCTGGCCTTCTGCGCCATCCTGCACCGGCACCGGCCCGA
CCTGCTAGATTTTGATTCGCTTTCCAAGGACAATGTCTTCGAGAATAACCGTTTGGCCTTTGAAGTGGCT
GAGAAGGAGCTGGGGATCCCCGCTCTCCTGGACCCCAATGACATGGTCTCCATGAGCGTCCCTGACTGCC
TCAGCATCATGACCTATGTGTCCCAGTATTACAACCACTTCTGCAGTCCTGGCCAAGCTGGTGTCTCGCC
ACCCAGAAAGGGCCTTGCACCCTGTTCCCCGCCGTCTGTAGCACCCACTCCAGTGGAACCAGAAGATGTG
GCTCAGGGCGAGGAGCTCTCCTCAGGCAGCCTGTCAGAGCAGGGCACCGGCCAGACCCCCAGCAGCACGT
GCGCAGCCTGCCAGCAGCATGTGCACTTGGTGCAGCGCTACCTGGCTGACGGCAGGCTGTACCATCGCCA
CTGCTTCCGGTGTCGGCGGTGCTCCAGCACCCTGCTCCCTGGGGCTTATGAGAATGGGCCTGAGGAGGGC
ACCTTTGTGTGTGCAGAACACTGTGCCAGGCTGGGCCCGGGGACACGGTCGGGGACCAGGCCTGGGCCCT
TCTCACAGCCAAAGCAGCAGCACCAGCAGCAACTCGCAGAAGATGCCAAGGATGTTCCAGGAGGCGGCCC
CAGCTCCAGTGCTCCTGCAGGGGCTGAGGCCGATGGACCCAAGGCCAGCCCTGAGGCCCGGCCGCAGATC
CCTACCAAGCCCCGGGTTCCTGGCAAACTACAGGAGCTGGCCAGCCCCCCTGCGGGCCGCCCCACCCCTG
CCCCCAGGAAGGCCTCTGAGAGCACCACCCCAGCACCCCCCACGCCCCGGCCCCGCTCCAGTCTGCAGCA
GGAGAACCTGGTGGAGCAGGCTGGCAGCAGCAGCCTGGTGAACGGGAGACTGCACGAACTGCCTGTCCCC
AAGCCGAGGGGGACACCGAAGCCGTCCGAGGGGACACCAGCCCCCAGGAAGGACCCCCCATGGATCACGC
TGGTGCAGGCAGAACCAAAGAAGAAGCCAGCCCCACTTCCCCCAAGCAGCAGCCCGGGGCCACCAAGCCA
GGACAGCAGGCAGGTGGAGAATGGAGGCACCGAGGAGGTGGCCCAGCCGAGCCCAACGGCCAGCCTGGAG
TCCAAACCCTATAACCCCTTTGAGGAGGAGGAGGAGGACAAGGAGGAAGAGGCTCCAGCTGCACCCAGCC
TGGCCACCAGCCCTGCCCTGGGCCACCCGGAGTCCACACCCAAGTCCCTGCACCCCTGGTACGGCATCAC
CCCTACCAGCAGCCCCAAGACAAAGAAGCGCCCTGCCCCGCGCGCACCCAGCGCGTCCCCACTGGCTCTC
CACGCCTCCCGCCTCTCGCACTCGGAGCCGCCCTCGGCCACACCATCGCCAGCGCTCAGCGTGGAGAGCC
TGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCAGAGCTTCTGGAGCCGCCAGCTGTGCCCAAGAGCTC
CTCAGAGCCTGCTGTCCATGCCCCTGGTACCCCTGGAAACCCTGTCAGCCTCTCTACCAACTCCTCCCTG
GCCTCCTCTGGGGAACTAGTGGAGCCTAGAGTGGAACAAATGCCTCAAGCCAGCCCTGGCCTTGCCCCCA
GGACCAGGGGCAGCTCAGGTCCCCAGCCAGCCAAGCCCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTT
GGTTGGAGACAGGAGCCCGGTGCCTTCCCCTGGAAGCTCGTCCCCACAGCTGCAGTCCTCCTGCAAGGAG
AATCCTTTTAACCGGAAGCCATCACCTGCAGCGTCCCCAGCCACAAAGAAGGCCACCAAGGGATCCAAGC
CAGTGAGGCCACCTGCCCCTGGACACGGCTTTCCACTCATCAAACGCAAGGTCCAGGCTGACCAGTACAT
CCCTGAGGAGGACATCCATGGAGAGATGGATACCATTGAGCGCCGGCTGGATGCCCTGGAGCACCGTGGG
GTGCTGCTGGAGGAGAAGCTGCGTGGCGGCCTGAATGAGGGCCGTGAGGATGACATGCTGGTGGACTGGT
TCAAGCTCATCCACGAGAAGCACCTACTGGTGCGGCGAGAGTCCGAGCTCATCTATGTCTTCAAGCAGCA
GAACCTGGAGCAGCGCCAGGCTGATGTCGAGTATGAGCTCCGGTGCCTCCTCAATAAGCCAGAAAAGGAC
TGGACGGAGGAGGACCGGGCCCGGGAGAAGGTGCTGATGCAGGAGCTTGTGACCCTCATTGAGCAGCGCA
ACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGGGAGGAAGAGGAAGACAAGATGTTGGAAGCCAT
GATCAAGAAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTCAAGACCATG
AAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACAAGAGCTAA

Translation (861 aa):
MAGPRGALLAWCRRQCEGYRGVEIRDLSSSFRDGLAFCAILHRHRPDLLDFDSLSKDNVFENNRLAFEVA
EKELGIPALLDPNDMVSMSVPDCLSIMTYVSQYYNHFCSPGQAGVSPPRKGLAPCSPPSVAPTPVEPEDV
AQGEELSSGSLSEQGTGQTPSSTCAACQQHVHLVQRYLADGRLYHRHCFRCRRCSSTLLPGAYENGPEEG
TFVCAEHCARLGPGTRSGTRPGPFSQPKQQHQQQLAEDAKDVPGGGPSSSAPAGAEADGPKASPEARPQI
PTKPRVPGKLQELASPPAGRPTPAPRKASESTTPAPPTPRPRSSLQQENLVEQAGSSSLVNGRLHELPVP
KPRGTPKPSEGTPAPRKDPPWITLVQAEPKKKPAPLPPSSSPGPPSQDSRQVENGGTEEVAQPSPTASLE
SKPYNPFEEEEEDKEEEAPAAPSLATSPALGHPESTPKSLHPWYGITPTSSPKTKKRPAPRAPSASPLAL
HASRLSHSEPPSATPSPALSVESLSSESASQTAGAELLEPPAVPKSSSEPAVHAPGTPGNPVSLSTNSSL
ASSGELVEPRVEQMPQASPGLAPRTRGSSGPQPAKPCSGATPTPLLLVGDRSPVPSPGSSSPQLQSSCKE
NPFNRKPSPAASPATKKATKGSKPVRPPAPGHGFPLIKRKVQADQYIPEEDIHGEMDTIERRLDALEHRG
VLLEEKLRGGLNEGREDDMLVDWFKLIHEKHLLVRRESELIYVFKQQNLEQRQADVEYELRCLLNKPEKD
WTEEDRAREKVLMQELVTLIEQRNAIINCLDEDRQREEEEDKMLEAMIKKKEFQREAEPEGKKKGKFKTM
KMLKLLGNKRDAKSKSPRDKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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