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Report for CCDS93369.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93369.1 Public Homo sapiens 3 ACAD9 24 110 108 CCDS HistoryNCBI Gene:28976Re-query CCDS DB by CCDS ID:93369.1Re-query CCDS DB by GeneID:28976See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93369.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000679715.1 ENSP00000506228.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679715.1Link to Ensembl Protein Viewer:ENSP00000506228.1Re-query CCDS DB by Nucleotide ID:ENST00000679715Re-query CCDS DB by Protein ID:ENSP00000506228
Current member NCBI NM_001410805.1 NP_001397734.1 Accepted alive Link to Nucleotide Sequence:NM_001410805.1Link to Protein Sequence:NP_001397734.1Re-query CCDS DB by Nucleotide ID:NM_001410805Re-query CCDS DB by Protein ID:NP_001397734Link to BLAST:NP_001397734.1

Chromosomal Locations for CCDS 93369.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 128895333 128895416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 128896436 128896536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 128897632 128897710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 128899287 128899461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 128901276 128901349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 128902553 128902628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 128904062 128904132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 128904386 128904505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 128906121 128906249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 128908185 128908264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 128908973 128909099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 128909344 128909421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 128910021 128910149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 128910741 128910813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 128912507 128912607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1497 nt):
ATGTACTCAAGACTAGGGGAGATCATCAGCATGGATGGGTCCATCACTGTGACCCTGGCAGCGCACCAGG
CTATTGGCCTCAAGGGGATCATCTTGGCTGGCACTGAGGAGCAGAAAGCCAAATACTTGCCTAAACTGGC
GTCCGGGGAGCACATTGCAGCCTTCTGCCTCACGGAGCCAGCCAGTGGGAGCGATGCAGCCTCAATCCGG
AGCAGAGCCACACTAAGTGAAGACAAGAAGCACTACATCCTCAATGGCTCCAAGGTCTGGATTACTAATG
GAGGACTGGCCAATATTTTTACTGTGTTTGCAAAGACTGAGGTCGTTGATTCTGATGGATCAGTGAAAGA
CAAAATCACAGCATTCATAGTAGAAAGAGACTTTGGTGGAGTCACTAATGGGAAACCCGAAGATAAATTA
GGCATTCGGGGCTCCAACACTTGTGAAGTCCATTTTGAAAACACCAAGATACCTGTGGAAAACATCCTTG
GAGAGGTCGGAGATGGGTTTAAGGTGGCCATGAACATCCTCAACAGCGGCCGGTTCAGCATGGGCAGCGT
CGTGGCTGGGCTGCTCAAGAGATTGATTGAAATGACTGCTGAGTACGCCTGCACAAGGAAACAGTTTAAC
AAGAGGCTCAGTGAATTTGGATTGATTCAGGAGAAATTTGCACTGATGGCTCAGAAGGCTTACGTCATGG
AGAGTATGACCTACCTCACAGCAGGGATGCTGGACCAACCTGGCTTTCCCGACTGCTCCATCGAGGCAGC
CATGGTGAAGGTGTTCAGCTCCGAGGCCGCCTGGCAGTGTGTGAGTGAGGCGCTGCAGATCCTCGGGGGC
TTGGGCTACACAAGGGACTATCCGTACGAGCGCATACTGCGTGACACCCGCATCCTCCTCATCTTCGAGG
GAACCAATGAGATTCTCCGGATGTACATCGCCCTGACGGGTCTGCAGCATGCCGGCCGCATCCTGACTAC
CAGGATCCATGAGCTTAAACAGGCCAAAGTGAGCACAGTCATGGATACCGTTGGCCGGAGGCTTCGGGAC
TCCCTGGGCCGAACTGTGGACCTGGGGCTGACAGGCAACCATGGAGTTGTGCACCCCAGTCTTGCGGACA
GTGCCAACAAGTTTGAGGAGAACACCTACTGCTTCGGCCGGACCGTGGAGACACTGCTGCTCCGCTTTGG
CAAGACCATCATGGAGGAGCAGCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATG
ACGGCCGTGCTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACCACGACCACGAGGTTCTCT
TGGCCAACACCTTCTGCGTGGAAGCTTACTTGCAGAATCTCTTCAGCCTCTCTCAGCTGGACAAGTATGC
TCCAGAAAACCTAGATGAGCAGATTAAGAAAGTGTCCCAGCAGATCCTTGAGAAGCGAGCCTATATCTGT
GCCCACCCTCTGGACAGGACATGCTGA

Translation (498 aa):
MYSRLGEIISMDGSITVTLAAHQAIGLKGIILAGTEEQKAKYLPKLASGEHIAAFCLTEPASGSDAASIR
SRATLSEDKKHYILNGSKVWITNGGLANIFTVFAKTEVVDSDGSVKDKITAFIVERDFGGVTNGKPEDKL
GIRGSNTCEVHFENTKIPVENILGEVGDGFKVAMNILNSGRFSMGSVVAGLLKRLIEMTAEYACTRKQFN
KRLSEFGLIQEKFALMAQKAYVMESMTYLTAGMLDQPGFPDCSIEAAMVKVFSSEAAWQCVSEALQILGG
LGYTRDYPYERILRDTRILLIFEGTNEILRMYIALTGLQHAGRILTTRIHELKQAKVSTVMDTVGRRLRD
SLGRTVDLGLTGNHGVVHPSLADSANKFEENTYCFGRTVETLLLRFGKTIMEEQLVLKRVANILINLYGM
TAVLSRASRSIRIGLRNHDHEVLLANTFCVEAYLQNLFSLSQLDKYAPENLDEQIKKVSQQILEKRAYIC
AHPLDRTC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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