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Report for CCDS9676.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9676.1 Public Homo sapiens 14 MIA2 24 110 108 CCDS HistoryNCBI Gene:4253Re-query CCDS DB by CCDS ID:9676.1Re-query CCDS DB by GeneID:4253See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9676.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000396165.8 ENSP00000379468.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396165.8Link to Ensembl Protein Viewer:ENSP00000379468.4Re-query CCDS DB by Nucleotide ID:ENST00000396165Re-query CCDS DB by Protein ID:ENSP00000379468
Original member Current member EBI ENST00000553352.1 ENSP00000450449.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000553352.1Link to Ensembl Protein Viewer:ENSP00000450449.1Re-query CCDS DB by Nucleotide ID:ENST00000553352Re-query CCDS DB by Protein ID:ENSP00000450449
Original member Current member NCBI NM_001354137.2 NP_001341066.1 Accepted alive Link to Nucleotide Sequence:NM_001354137.2Link to Protein Sequence:NP_001341066.1Re-query CCDS DB by Nucleotide ID:NM_001354137Re-query CCDS DB by Protein ID:NP_001341066Link to BLAST:NP_001341066.1
Original member Current member NCBI NM_001354138.1 NP_001341067.1 Accepted alive Link to Nucleotide Sequence:NM_001354138.1Link to Protein Sequence:NP_001341067.1Re-query CCDS DB by Nucleotide ID:NM_001354138Re-query CCDS DB by Protein ID:NP_001341067Link to BLAST:NP_001341067.1
Original member Current member NCBI NM_203356.2 NP_976231.1 Accepted alive Link to Nucleotide Sequence:NM_203356.2Link to Protein Sequence:NP_976231.1Re-query CCDS DB by Nucleotide ID:NM_203356Re-query CCDS DB by Protein ID:NP_976231Link to BLAST:NP_976231.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001341066.1 775 Q96PC5-9 775 100% 0 0
NP_001341067.1 775 Q96PC5-9 775 100% 0 0
NP_976231.1 775 Q96PC5-9 775 100% 0 0

Chromosomal Locations for CCDS 9676.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 39276958 39277065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39279337 39279358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39279449 39279537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39291019 39291096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39293271 39293381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39294000 39294071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39294925 39295029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39299864 39299986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39302129 39302249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39303478 39303524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39304291 39304381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39308449 39308587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39313340 39313441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39314739 39314799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39315683 39315718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39317944 39318011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39319209 39319291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39320928 39321056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39326864 39327022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39345904 39346026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39347713 39347771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39348743 39348977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39350098 39350264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2328 nt):
ATGAGACCAGATTCTAATCTTTATGGTTTTCCATGGGAATTGGTGATATGTGCAGCTGTTGTTGGATTTT
TTGCTGTTCTCTTTTTTTTGTGGAGAAGTTTTAGATCGGTTAGGAGTCGGCTTTATGTGGGACGAGAGAA
AAAGCTTGCTCTAATGCTTTCTGGACTAATTGAAGAAAAAAGTAAACTACTTGAAAAATTTAGCCTTGTT
CAAAAAGAGTATGAAGGCTATGAAGTAGAGTCATCTTTAAAGGATGCCAGCTTTGAGAAGGAGGCAACAG
AAGCACAAAGTTTGGAGGCAACCTGTGAAAAGCTGAACAGGTCCAATTCTGAACTTGAGGATGAAATACT
CTGTCTAGAAAAAGAGTTAAAAGAAGAGAAATCCAAACATTCTGAACAAGATGAATTGATGGCGGATATT
TCAAAAAGGATACAGTCTCTAGAAGATGAGTCAAAATCCCTCAAATCACAAGTAGCTGAAGCCAAAATGA
CCTTCAAGATATTTCAAATGAATGAAGAACGACTGAAGATAGCAATAAAAGATGCTTTGAATGAAAATTC
TCAACTTCAGGAAAGCCAGAAACAGCTTTTGCAAGAAGCTGAAGTATGGAAAGAACAAGTGAGTGAACTT
AATAAACAGAAAGTAACATTTGAAGACTCCAAAGTACATGCAGAACAAGTTCTAAATGATAAAGAAAGTC
ACATCAAGACTCTGACTGAACGCTTGTTAAAGATGAAAGATTGGGCTGCTATGCTTGGAGAAGACATAAC
GGATGATGATAACTTGGAATTAGAAATGAACAGTGAATCGGAAAATGGTGCTTACTTAGATAATCCTCCA
AAAGGAGCTTTGAAGAAACTGATTCATGCTGCTAAGTTAAATGCTTCTTTAAAAACCTTAGAAGGAGAAA
GAAACCAAATTTATATTCAGTTGTCTGAAGTTGATAAAACAAAGGAAGAGCTTACAGAGCATATTAAAAA
TCTTCAGACTGAACAAGCATCTTTGCAGTCAGAAAACACACATTTTGAAAATGAGAATCAGAAGCTTCAA
CAGAAACTTAAAGTAATGACTGAATTATATCAAGAAAATGAAATGAAACTCCACAGGAAATTAACAGTAG
AGGAAAATTATCGGTTAGAGAAAGAAGAGAAACTTTCTAAAGTAGATGAAAAGATCAGCCATGCCACTGA
AGAGCTGGAGACCTATAGAAAGCGAGCCAAAGATCTTGAAGAAGAATTGGAGAGAACTATTCATTCTTAT
CAAGGGCAGATTATTTCCCATGAGAAAAAAGCACATGATAATTGGTTGGCAGCTCGGAATGCTGAAAGAA
ACCTCAATGATTTAAGGAAAGAAAATGCTCACAACAGACAAAAATTAACTGAAACAGAGCTTAAATTTGA
ACTTTTAGAAAAAGATCCTTATGCACTCGATGTTCCAAATACAGCATTTGGCAGAGAGCATTCCCCATAT
GGTCCCTCACCATTGGGTTGGCCTTCATCTGAAACAAGAGCTTTTCTCTCTCCTCCAACTTTGTTGGAGG
GTCCACTCAGACTCTCACCTTTGCTTCCAGGGGGAGGAGGAAGAGGCTCACGAGGCCCAGGGAATCCTCT
GGACCATCAGATTACCAATGAAAGAGGAGAATCAAGCTGTGATAGGTTAACCGATCCTCATAGGGCTCCC
TCTGACACTGGGTCTCTGTCACCTCCATGGGACCAGGACCGTAGGATGATGTTTCCTCCGCCAGGACAAT
CATATCCTGATTCAGCCCTTCCTCCACAAAGGCAAGACAGATTTTGTTCTAATTCTGGTAGACTGTCTGG
ACCAGCAGAACTCAGAAGTTTTAATATGCCTTCTTTGGATAAAATGGATGGGTCAATGCCTTCAGAAATG
GAATCCAGTAGAAATGATACCAAAGATGATCTTGGTAATTTAAATGTGCCTGATTCATCTCTCCCTGCTG
AAAATGAAGCCACTGGCCCTGGCTTTGTTCCTCCACCTCTTGCTCCAATCAGAGGTCCATTGTTTCCAGT
GGATGCAAGAGGCCCATTCTTGAGAAGAGGACCTCCTTTCCCCCCACCTCCTCCAGGAGCCATGTTTGGA
GCTTCTCGAGATTATTTTCCACCAGGGGATTTCCCAGGTCCACCACCTGCTCCATTTGCAATGAGAAATG
TCTATCCACCGAGGGGTTTTCCTCCTTACCTTCCCCCAAGACCTGGATTTTTCCCCCCACCCCCACATTC
TGAAGGTAGAAGTGAGTTCCCCTCAGGTTTGATTCCACCTTCAAATGAGCCTGCTACTGAACATCCAGAA
CCACAGCAAGAAACCTGA

Translation (775 aa):
MRPDSNLYGFPWELVICAAVVGFFAVLFFLWRSFRSVRSRLYVGREKKLALMLSGLIEEKSKLLEKFSLV
QKEYEGYEVESSLKDASFEKEATEAQSLEATCEKLNRSNSELEDEILCLEKELKEEKSKHSEQDELMADI
SKRIQSLEDESKSLKSQVAEAKMTFKIFQMNEERLKIAIKDALNENSQLQESQKQLLQEAEVWKEQVSEL
NKQKVTFEDSKVHAEQVLNDKESHIKTLTERLLKMKDWAAMLGEDITDDDNLELEMNSESENGAYLDNPP
KGALKKLIHAAKLNASLKTLEGERNQIYIQLSEVDKTKEELTEHIKNLQTEQASLQSENTHFENENQKLQ
QKLKVMTELYQENEMKLHRKLTVEENYRLEKEEKLSKVDEKISHATEELETYRKRAKDLEEELERTIHSY
QGQIISHEKKAHDNWLAARNAERNLNDLRKENAHNRQKLTETELKFELLEKDPYALDVPNTAFGREHSPY
GPSPLGWPSSETRAFLSPPTLLEGPLRLSPLLPGGGGRGSRGPGNPLDHQITNERGESSCDRLTDPHRAP
SDTGSLSPPWDQDRRMMFPPPGQSYPDSALPPQRQDRFCSNSGRLSGPAELRSFNMPSLDKMDGSMPSEM
ESSRNDTKDDLGNLNVPDSSLPAENEATGPGFVPPPLAPIRGPLFPVDARGPFLRRGPPFPPPPPGAMFG
ASRDYFPPGDFPGPPPAPFAMRNVYPPRGFPPYLPPRPGFFPPPPHSEGRSEFPSGLIPPSNEPATEHPE
PQQET


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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