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Report for CCDS9766.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9766.1 Public Homo sapiens 14 HSPA2 24 110 108 CCDS HistoryNCBI Gene:3306Re-query CCDS DB by CCDS ID:9766.1Re-query CCDS DB by GeneID:3306See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9766.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000247207.7 ENSP00000247207.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000247207.7Link to Ensembl Protein Viewer:ENSP00000247207.6Re-query CCDS DB by Nucleotide ID:ENST00000247207Re-query CCDS DB by Protein ID:ENSP00000247207
Original member Current member EBI ENST00000394709.2 ENSP00000378199.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000394709.2Link to Ensembl Protein Viewer:ENSP00000378199.1Re-query CCDS DB by Nucleotide ID:ENST00000394709Re-query CCDS DB by Protein ID:ENSP00000378199
Original member Current member NCBI NM_001387931.1 NP_001374860.1 Accepted alive Link to Nucleotide Sequence:NM_001387931.1Link to Protein Sequence:NP_001374860.1Re-query CCDS DB by Nucleotide ID:NM_001387931Re-query CCDS DB by Protein ID:NP_001374860Link to BLAST:NP_001374860.1
Original member Current member NCBI NM_021979.4 NP_068814.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021979.4Link to Protein Sequence:NP_068814.2Re-query CCDS DB by Nucleotide ID:NM_021979Re-query CCDS DB by Protein ID:NP_068814Link to BLAST:NP_068814.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001374860.1 639 P54652 639 100% 0 0
NP_068814.2 639 P54652 639 100% 0 0

Chromosomal Locations for CCDS 9766.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 64540850 64542769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1920 nt):
ATGTCTGCCCGTGGCCCGGCTATCGGCATCGACCTGGGCACCACCTATTCGTGCGTCGGGGTCTTCCAAC
ATGGCAAGGTGGAGATCATCGCCAACGACCAGGGCAATCGCACCACCCCCAGCTACGTGGCCTTCACGGA
CACCGAGCGCCTCATCGGCGACGCCGCCAAGAACCAGGTGGCCATGAACCCCACCAACACCATCTTCGAC
GCCAAGAGGCTGATTGGACGGAAATTCGAGGATGCCACAGTGCAGTCGGATATGAAACACTGGCCGTTCC
GGGTGGTGAGCGAGGGAGGCAAGCCCAAAGTGCAAGTAGAGTACAAGGGGGAGACCAAGACCTTCTTCCC
AGAGGAGATATCCTCCATGGTCCTCACGAAGATGAAGGAGATCGCGGAAGCCTACCTGGGGGGCAAGGTG
CACAGCGCGGTCATAACGGTCCCGGCCTATTTCAACGACTCGCAGCGCCAGGCCACCAAGGACGCAGGCA
CCATCACGGGGCTCAATGTGCTGCGCATCATCAACGAGCCCACGGCGGCGGCCATCGCCTACGGCCTGGA
CAAGAAGGGCTGCGCGGGCGGCGAGAAGAACGTGCTCATCTTTGACCTGGGCGGTGGCACTTTCGACGTG
TCCATCCTGACCATCGAGGATGGCATCTTCGAGGTGAAGTCCACGGCCGGCGACACCCACCTGGGCGGTG
AGGACTTCGACAACCGCATGGTGAGCCACCTGGCGGAGGAGTTCAAGCGCAAGCACAAGAAGGACATTGG
GCCCAACAAGCGCGCCGTGAGGCGGCTGCGCACCGCTTGCGAGCGCGCCAAGCGCACCCTGAGCTCGTCC
ACGCAGGCGAGCATCGAGATCGACTCGCTCTACGAGGGCGTGGACTTCTATACGTCCATCACGCGCGCCC
GCTTCGAGGAGCTCAATGCCGACCTCTTTCGCGGGACCCTGGAGCCGGTGGAGAAGGCGCTGCGCGACGC
CAAGCTGGACAAGGGCCAGATCCAGGAGATCGTGCTGGTGGGCGGCTCCACTCGTATCCCCAAGATCCAG
AAGCTGCTGCAGGATTTCTTCAACGGCAAGGAGCTGAACAAGAGCATCAACCCCGACGAGGCGGTGGCCT
ATGGCGCCGCGGTGCAGGCGGCCATCCTCATCGGCGACAAATCAGAGAATGTGCAGGACCTGCTGCTACT
CGACGTGACCCCGTTGTCGCTGGGCATCGAGACAGCTGGCGGTGTCATGACCCCACTCATCAAGAGGAAC
ACCACGATCCCCACCAAGCAGACGCAGACCTTCACCACCTACTCGGACAACCAGAGCAGCGTACTGGTGC
AGGTATACGAGGGCGAACGGGCCATGACCAAGGACAATAACCTGCTGGGCAAGTTCGACCTGACCGGGAT
TCCCCCTGCGCCTCGCGGGGTCCCCCAAATCGAGGTTACCTTCGACATTGACGCCAATGGCATCCTTAAC
GTTACCGCCGCCGACAAGAGCACCGGTAAGGAAAACAAAATCACCATCACCAATGACAAAGGTCGTCTGA
GCAAGGACGACATTGACCGGATGGTGCAGGAGGCGGAGCGGTACAAATCGGAAGATGAGGCGAATCGCGA
CCGAGTCGCGGCCAAAAACGCCCTGGAGTCCTATACCTACAACATCAAGCAGACGGTGGAAGACGAGAAA
CTGAGGGGCAAGATTAGCGAGCAGGACAAAAACAAGATCCTCGACAAGTGTCAGGAGGTGATCAACTGGC
TCGACCGAAACCAGATGGCAGAGAAAGATGAGTATGAACACAAGCAGAAAGAGCTCGAAAGAGTTTGCAA
CCCCATCATCAGCAAACTTTACCAAGGTGGTCCTGGCGGCGGCAGCGGCGGCGGCGGTTCAGGAGCCTCC
GGGGGACCCACCATCGAAGAAGTGGACTAA

Translation (639 aa):
MSARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFD
AKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKV
HSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDV
SILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSS
TQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQ
KLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTPLSLGIETAGGVMTPLIKRN
TTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILN
VTAADKSTGKENKITITNDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNALESYTYNIKQTVEDEK
LRGKISEQDKNKILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQGGPGGGSGGGGSGAS
GGPTIEEVD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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