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Report for CCDS9864.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9864.1 Public Homo sapiens 14 ISM2 24 110 108 CCDS HistoryNCBI Gene:145501Re-query CCDS DB by CCDS ID:9864.1Re-query CCDS DB by GeneID:145501See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9864.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000342219.9 ENSP00000341490.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000342219.9Link to Ensembl Protein Viewer:ENSP00000341490.4Re-query CCDS DB by Nucleotide ID:ENST00000342219Re-query CCDS DB by Protein ID:ENSP00000341490
Original member Current member NCBI NM_199296.3 NP_954993.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_199296.3Link to Protein Sequence:NP_954993.1Re-query CCDS DB by Nucleotide ID:NM_199296Re-query CCDS DB by Protein ID:NP_954993Link to BLAST:NP_954993.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_954993.1 571 Q6H9L7-1 571 100% 0 0

Chromosomal Locations for CCDS 9864.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 77475595 77476112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77478242 77478325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77478575 77478715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77482322 77482667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77484323 77484565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77484677 77484919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77498653 77498793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1716 nt):
ATGCGTGCGCTCCGCGACCGAGCCGGGCTCCTCCTCTGCGTGCTGCTGCTGGCGGCGCTGCTGGAGGCGG
CGCTAGGGCTCCCCGTGAAGAAGCCGCGGCTCCGCGGACCACGGCCTGGGAGCCTCACGAGGCTCGCAGA
GGTCTCAGCCTCCCCAGATCCTAGGCCTCTGAAGGAAGAGGAGGAGGCACCACTGCTCCCCAGAACCCAC
CTGCAGGCAGAGCCACACCAACATGGATGCTGGACTGTCACTGAGCCAGCAGCCATGACCCCAGGCAACG
CCACCCCTCCCAGGACCCCAGAGGTTACTCCGTTGCGGCTGGAGCTGCAGAAGCTGCCGGGATTGGCCAA
CACAACCTTGAGTACCCCTAACCCTGATACCCAGGCTTCAGCCTCCCCAGATCCTAGGCCTCTGAGGGAA
GAGGAGGAGGCACGACTGCTCCCCAGAACCCACCTGCAGGCAGAGCTACACCAACATGGATGTTGGACTG
TCACTGAGCCAGCAGCCCTGACCCCAGGGAATGCCACGCCTCCCAGGACCCAGGAGGTTACTCCCTTGCT
GCTGGAGCTGCAGAAGCTGCCAGAATTGGTCCACGCAACCTTGAGTACCCCTAACCCTGATAACCAGGTG
ACCATCAAGGTGGTGGAGGACCCCCAGGCCGAGGTGTCGATAGACCTGTTGGCTGAGCCCAGCAATCCCC
CGCCCCAGGATACCCTTAGCTGGCTGCCCGCCCTCTGGTCCTTCCTCTGGGGAGACTACAAAGGAGAGGA
AAAAGACAGGGCCCCAGGGGAGAAGGGGGAGGAAAAGGAGGAAGACGAGGACTATCCTTCAGAGGATATC
GAGGGTGAGGATCAAGAGGACAAAGAGGAAGATGAGGAAGAGCAGGCGCTCTGGTTCAATGGAACTACAG
ACAACTGGGACCAGGGCTGGCTGGCCCCCGGGGATTGGGTCTTCAAGGATTCTGTCAGCTACGACTATGA
GCCTCAGAAGGAGTGGAGTCCCTGGTCTCCCTGCAGTGGGAACTGCAGCACTGGCAAGCAGCAGAGGACT
CGGCCCTGTGGCTATGGCTGCACTGCCACCGAGACCCGTACCTGTGACCTGCCCTCCTGTCCTGGCACTG
AGGACAAGGACACCTTGGGCCTCCCCAGTGAGGAGTGGAAGCTCCTGGCCCGCAATGCTACGGACATGCA
TGATCAAGATGTGGACAGCTGTGAGAAGTGGCTGAACTGCAAGAGCGACTTCCTAATCAAGTATCTGAGC
CAGATGCTGCGGGACCTGCCCAGCTGCCCGTGTGCCTACCCACTGGAGGCCATGGACAGCCCTGTGAGCC
TACAGGACGAGCACCAGGGCCGCAGCTTCCGGTGGAGGGATGCCAGTGGCCCTCGCGAGCGCCTGGACAT
CTACCAGCCCACGGCGCGCTTCTGCCTGCGTTCCATGCTGTCTGGGGAGAGCAGCACACTGGCCGCCCAG
CACTGCTGCTATGACGAGGACAGCCGGCTGCTGACCCGTGGCAAGGGCGCCGGCATGCCCAACCTCATCA
GCACCGACTTCTCACCTAAGCTGCACTTCAAGTTCGACACGACGCCCTGGATCCTGTGCAAGGGGGACTG
GAGCCGCCTCCACGCTGTGCTCCCTCCCAACAACGGCCGAGCCTGCACCGACAACCCCCTGGAGGAGGAG
TACCTAGCACAGTTGCAGGAGGCCAAGGAGTACTAG

Translation (571 aa):
MRALRDRAGLLLCVLLLAALLEAALGLPVKKPRLRGPRPGSLTRLAEVSASPDPRPLKEEEEAPLLPRTH
LQAEPHQHGCWTVTEPAAMTPGNATPPRTPEVTPLRLELQKLPGLANTTLSTPNPDTQASASPDPRPLRE
EEEARLLPRTHLQAELHQHGCWTVTEPAALTPGNATPPRTQEVTPLLLELQKLPELVHATLSTPNPDNQV
TIKVVEDPQAEVSIDLLAEPSNPPPQDTLSWLPALWSFLWGDYKGEEKDRAPGEKGEEKEEDEDYPSEDI
EGEDQEDKEEDEEEQALWFNGTTDNWDQGWLAPGDWVFKDSVSYDYEPQKEWSPWSPCSGNCSTGKQQRT
RPCGYGCTATETRTCDLPSCPGTEDKDTLGLPSEEWKLLARNATDMHDQDVDSCEKWLNCKSDFLIKYLS
QMLRDLPSCPCAYPLEAMDSPVSLQDEHQGRSFRWRDASGPRERLDIYQPTARFCLRSMLSGESSTLAAQ
HCCYDEDSRLLTRGKGAGMPNLISTDFSPKLHFKFDTTPWILCKGDWSRLHAVLPPNNGRACTDNPLEEE
YLAQLQEAKEY


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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