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Report for CCDS9919.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9919.1 Public Homo sapiens 14 IFI27L1 24 110 108 CCDS HistoryNCBI Gene:122509Re-query CCDS DB by CCDS ID:9919.1Re-query CCDS DB by GeneID:122509See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9919.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000393115.7 ENSP00000376824.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393115.7Link to Ensembl Protein Viewer:ENSP00000376824.3Re-query CCDS DB by Nucleotide ID:ENST00000393115Re-query CCDS DB by Protein ID:ENSP00000376824
Original member Current member EBI ENST00000555523.6 ENSP00000451851.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000555523.6Link to Ensembl Protein Viewer:ENSP00000451851.1Re-query CCDS DB by Nucleotide ID:ENST00000555523Re-query CCDS DB by Protein ID:ENSP00000451851
Original member Current member NCBI NM_145249.3 NP_660292.1 Accepted alive Link to Nucleotide Sequence:NM_145249.3Link to Protein Sequence:NP_660292.1Re-query CCDS DB by Nucleotide ID:NM_145249Re-query CCDS DB by Protein ID:NP_660292Link to BLAST:NP_660292.1
Original member Current member NCBI NM_206949.3 NP_996832.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_206949.3Link to Protein Sequence:NP_996832.1Re-query CCDS DB by Nucleotide ID:NM_206949Re-query CCDS DB by Protein ID:NP_996832Link to BLAST:NP_996832.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_660292.1 104 Q96BM0 104 100% 0 0
NP_996832.1 104 Q96BM0 104 100% 0 0

Chromosomal Locations for CCDS 9919.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 94096938 94096965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94100739 94100771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94101814 94101975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94102477 94102568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (315 nt):
ATGGGAAAGGAGAGTGGATGGGACTCAGGCAGGGCTGCTGTAGCAGCTGTGGTCGGAGGAGTTGTGGCTG
TGGGGACTGTGCTCGTGGCGCTCAGTGCCATGGGCTTCACCTCAGTAGGAATCGCCGCATCCTCCATAGC
AGCCAAGATGATGTCTACAGCAGCCATTGCCAACGGGGGCGGAGTTGCTGCTGGCAGTCTGGTGGCTATT
CTGCAGTCAGTGGGGGCAGCTGGACTCTCTGTGACATCTAAAGTTATCGGGGGCTTTGCTGGGACAGCTC
TTGGGGCCTGGCTGGGTTCACCCCCTTCCAGCTGA

Translation (104 aa):
MGKESGWDSGRAAVAAVVGGVVAVGTVLVALSAMGFTSVGIAASSIAAKMMSTAAIANGGGVAAGSLVAI
LQSVGAAGLSVTSKVIGGFAGTALGAWLGSPPSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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