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Report for CCDS87383.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87383.1 Public Homo sapiens 6 LY6G6F-LY6G6D 24 110 108 CCDS HistoryNCBI Gene:110599563Re-query CCDS DB by CCDS ID:87383.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87383.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000503322.1 ENSP00000421232.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000503322.1Link to Ensembl Protein Viewer:ENSP00000421232.1Re-query CCDS DB by Nucleotide ID:ENST00000503322Re-query CCDS DB by Protein ID:ENSP00000421232
Original member Current member NCBI NM_001353334.2 NP_001340263.1 Accepted alive Link to Nucleotide Sequence:NM_001353334.2Link to Protein Sequence:NP_001340263.1Re-query CCDS DB by Nucleotide ID:NM_001353334Re-query CCDS DB by Protein ID:NP_001340263Link to BLAST:NP_001340263.1

Chromosomal Locations for CCDS 87383.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 31706907 31706958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31707458 31707787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31707871 31708134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31710026 31710181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31715502 31715624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31717581 31717804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1149 nt):
ATGGCAGTCTTATTCCTCCTCCTGTTCCTATGTGGAACTCCCCAGGCTGCAGACAACATGCAGGCCATCT
ATGTGGCCTTGGGGGAGGCAGTAGAGCTGCCATGTCCCTCACCACCTACTCTACATGGGGACGAACACCT
GTCATGGTTCTGCAGCCCTGCAGCAGGCTCCTTCACCACCCTGGTAGCCCAAGTCCAAGTGGGCAGGCCA
GCCCCAGACCCTGGAAAACCAGGAAGGGAATCCAGGCTCAGACTGCTGGGGAACTATTCTTTGTGGTTGG
AGGGATCCAAAGAGGAAGATGCCGGGCGGTACTGGTGCGCTGTGCTAGGTCAGCACCACAACTACCAGAA
CTGGAGGGTGTACGACGTCTTGGTGCTCAAAGGATCCCAGTTATCTGCAAGGGCTGCAGATGGATCCCCC
TGCAATGTCCTCCTGTGCTCTGTGGTCCCCAGCAGACGCATGGACTCTGTGACCTGGCAGGAAGGGAAGG
GTCCCGTGAGGGGCCGTGTTCAGTCCTTCTGGGGCAGTGAGGCTGCCCTGCTCTTGGTGTGTCCTGGGGA
GGGGCTTTCTGAGCCCAGGAGCCGAAGACCAAGAATCATCCGCTGCCTCATGACTCACAACAAAGGGGTC
AGCTTTAGCCTGGCAGCCTCCATCGATGCTTCTCCTGCCCTCTGTGCCCCTTCCACGGGCTGGGACATGC
CTTGGATTCTGATGCTGCTGCTCACAATGGGCCAGGGAGTTGTCATCCTGGCCCTCAGCATCGTGCTCTG
GAGGCAGAGGGTCCGTGGGGCTCCAGGCAGAGGAAACCGAATGCGGTGCTACAACTGTGGTGGAAGCCCC
AGCAGTTCTTGCAAAGAGGCCGTGACCACCTGTGGCGAGGGCAGACCCCAGCCAGGCCTGGAACAGATCA
AGCTACCTGGAAACCCCCCAGTGACCTTGATTCACCAACATCCAGCCTGCGTCGCAGCCCATCATTGCAA
TCAAGTGGAGACAGAGTCGGTGGGAGACGTGACTTATCCAGCCCACAGGGACTGCTACCTGGGAGACCTG
TGCAACAGCGCCGTGGCAAGCCATGTGGCCCCTGCAGGCATTTTGGCTGCAGCAGCTACCGCCCTGACCT
GTCTCTTGCCAGGACTGTGGAGCGGATAG

Translation (382 aa):
MAVLFLLLFLCGTPQAADNMQAIYVALGEAVELPCPSPPTLHGDEHLSWFCSPAAGSFTTLVAQVQVGRP
APDPGKPGRESRLRLLGNYSLWLEGSKEEDAGRYWCAVLGQHHNYQNWRVYDVLVLKGSQLSARAADGSP
CNVLLCSVVPSRRMDSVTWQEGKGPVRGRVQSFWGSEAALLLVCPGEGLSEPRSRRPRIIRCLMTHNKGV
SFSLAASIDASPALCAPSTGWDMPWILMLLLTMGQGVVILALSIVLWRQRVRGAPGRGNRMRCYNCGGSP
SSSCKEAVTTCGEGRPQPGLEQIKLPGNPPVTLIHQHPACVAAHHCNQVETESVGDVTYPAHRDCYLGDL
CNSAVASHVAPAGILAAAATALTCLLPGLWSG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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