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Report for CCDS77596.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77596.1 Public Homo sapiens 20 ANKRD60 24 110 108 CCDS HistoryNCBI Gene:140731Re-query CCDS DB by CCDS ID:77596.1See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77596.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000457363.2 ENSP00000396747.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000457363.2Link to Ensembl Protein Viewer:ENSP00000396747.1Re-query CCDS DB by Nucleotide ID:ENST00000457363Re-query CCDS DB by Protein ID:ENSP00000396747
Original member Current member NCBI NM_001304369.2 NP_001291298.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001304369.2Link to Protein Sequence:NP_001291298.1Re-query CCDS DB by Nucleotide ID:NM_001304369Re-query CCDS DB by Protein ID:NP_001291298Link to BLAST:NP_001291298.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001291298.1 345 Q9BZ19 345 100% 0 0

Chromosomal Locations for CCDS 77596.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 58218495 58218805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 58221338 58221503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 58223052 58223182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 58228224 58228653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1038 nt):
ATGACGCGCGGCCGCGCCTGGGGGATGCGGCGGGCGGCGGCGGGGGCGGGCGGAGCGCGGGCGGCGGGGC
CAACTGGGGGCGCCTCTCGCCTGCACCCCAATGCGGGACGCAGGAGCGGTGCGCGGGCCGGGGCTCAGGG
GTGCGGCGGGCCCAGGGTGGGCTCGGCGGACTCGCGGGCCCTCCCCGCGCAGCCCCTGGCCTGTGCCCGC
GGCCGGAGCCAGCGGCTCGTCTGTGACCCGAAGGCCGCGAGTGCCTTGCCCGACTTGGCCCCTGACGTCT
TCGTCCTGCGGGTGCGGCTGGAGGAGACGGGGGAGATGTTCCGAGTGGCAAACTGCCGCGGCGACATGAC
CGTGCGGGAGCTCAAAGAGGAGCTGGACCTGATGGTCGGCATCCCCTTCAACCTCCAGCGGCTCCAGTAC
CTCGACGAAGGAGTTTTGATGGATGACACTACCCTGAAGTTCCATGATGTTGTTCCTGGAGGGATTATTT
CATTATGTATCTGGCATCATGACGGATGGACAGAACTTGTTTTGGCGGCTGTGGAAGGGGATCCCAGCAA
GCTATCTTGTCTCGGGCTTACTGAAGATTCCTTCTACCGAACCGCAAATTCAGAACATTTTGAGGGTGAG
AAGTGGAAGCACTGGACGTCTCAGAGGGCGTTTGTGGCGTTGTATGTGGCCTCACACAGAGGCCACTTTG
ATGCTGTGCAGTACCTTCTAGAACACGGAGCCAGCTGCCTCAGCAGATCCCCCCTGGGCAGGACACCCCT
GCATGTGGCTGCAGCTATGGGCCGGTCAGACTGTATAATCCTCCTGCTCCAGCACGGGGCCTCCATCCAC
GACAGAGATGCCAAGGGGGAGACCCCCATCTCCATTGCACACCGCCTGAACCACACACTGAGCGAGAGGC
AGATGGTCCTCCTCCACCGGATAGCAAAGTCGGGGATAAGGGATCTGAATGACTTGGTCATGAAGAATGC
TTTGCAGAGGGTCAAGTCTGGGTTTAGGTCTGAGAAGATGACGATGACCCCTCATTAG

Translation (345 aa):
MTRGRAWGMRRAAAGAGGARAAGPTGGASRLHPNAGRRSGARAGAQGCGGPRVGSADSRALPAQPLACAR
GRSQRLVCDPKAASALPDLAPDVFVLRVRLEETGEMFRVANCRGDMTVRELKEELDLMVGIPFNLQRLQY
LDEGVLMDDTTLKFHDVVPGGIISLCIWHHDGWTELVLAAVEGDPSKLSCLGLTEDSFYRTANSEHFEGE
KWKHWTSQRAFVALYVASHRGHFDAVQYLLEHGASCLSRSPLGRTPLHVAAAMGRSDCIILLLQHGASIH
DRDAKGETPISIAHRLNHTLSERQMVLLHRIAKSGIRDLNDLVMKNALQRVKSGFRSEKMTMTPH


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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