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Report for CCDS13079.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13079.1 Public Homo sapiens 20 ADRA1D 24 110 108 CCDS HistoryNCBI Gene:146Re-query CCDS DB by CCDS ID:13079.1See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13079.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000379453.6 ENSP00000368766.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000379453.6Link to Ensembl Protein Viewer:ENSP00000368766.4Re-query CCDS DB by Nucleotide ID:ENST00000379453Re-query CCDS DB by Protein ID:ENSP00000368766
Original member Current member NCBI NM_000678.4 NP_000669.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000678.4Link to Protein Sequence:NP_000669.1Re-query CCDS DB by Nucleotide ID:NM_000678Re-query CCDS DB by Protein ID:NP_000669Link to BLAST:NP_000669.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000669.1 572 P25100 572 100% 0 0

Chromosomal Locations for CCDS 13079.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 4221523 4222130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 4247847 4248957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1719 nt):
ATGACTTTCCGCGATCTCCTGAGCGTCAGTTTCGAGGGACCCCGCCCGGACAGCAGCGCAGGGGGCTCCA
GCGCGGGCGGCGGCGGGGGCAGCGCGGGCGGCGCGGCCCCCTCGGAGGGCCCGGCGGTGGGCGGCGTGCC
GGGGGGCGCGGGCGGCGGCGGCGGCGTGGTGGGCGCAGGCAGCGGCGAGGACAACCGGAGCTCCGCGGGG
GAGCCGGGGAGCGCGGGCGCGGGCGGCGACGTGAATGGCACGGCGGCCGTCGGGGGACTGGTGGTGAGCG
CGCAGGGCGTGGGCGTGGGCGTCTTCCTGGCAGCCTTCATCCTTATGGCCGTGGCAGGTAACCTGCTTGT
CATCCTCTCAGTGGCCTGCAACCGCCACCTGCAGACCGTCACCAACTATTTCATCGTGAACCTGGCCGTG
GCCGACCTGCTGCTGAGCGCCACCGTACTGCCCTTCTCGGCCACCATGGAGGTTCTGGGCTTCTGGGCCT
TTGGCCGCGCCTTCTGCGACGTATGGGCCGCCGTGGACGTGCTGTGCTGCACGGCCTCCATCCTCAGCCT
CTGCACCATCTCCGTGGACCGGTACGTGGGCGTGCGCCACTCACTCAAGTACCCAGCCATCATGACCGAG
CGCAAGGCGGCCGCCATCCTGGCCCTGCTCTGGGTCGTAGCCCTGGTGGTGTCCGTAGGGCCCCTGCTGG
GCTGGAAGGAGCCCGTGCCCCCTGACGAGCGCTTCTGCGGTATCACCGAGGAGGCGGGCTACGCTGTCTT
CTCCTCCGTGTGCTCCTTCTACCTGCCCATGGCGGTCATCGTGGTCATGTACTGCCGCGTGTACGTGGTC
GCGCGCAGCACCACGCGCAGCCTCGAGGCGGGCGTCAAGCGCGAGCGAGGCAAGGCCTCCGAGGTGGTGC
TGCGCATCCACTGTCGCGGCGCGGCCACGGGCGCCGACGGGGCGCACGGCATGCGCAGCGCCAAGGGCCA
CACCTTCCGCAGCTCGCTCTCCGTGCGCCTGCTCAAGTTCTCCCGTGAGAAGAAAGCGGCCAAGACTCTG
GCCATCGTCGTGGGTGTCTTCGTGCTCTGCTGGTTCCCTTTCTTCTTTGTCCTGCCGCTCGGCTCCTTGT
TCCCGCAGCTGAAGCCATCGGAGGGCGTCTTCAAGGTCATCTTCTGGCTCGGCTACTTCAACAGCTGCGT
GAACCCGCTCATCTACCCCTGTTCCAGCCGCGAGTTCAAGCGCGCCTTCCTCCGTCTCCTGCGCTGCCAG
TGCCGTCGTCGCCGGCGCCGCCGCCCTCTCTGGCGTGTCTACGGCCACCACTGGCGGGCCTCCACCAGCG
GCCTGCGCCAGGACTGCGCCCCGAGTTCGGGCGACGCGCCCCCCGGAGCGCCGCTGGCCCTCACCGCGCT
CCCCGACCCCGACCCCGAACCCCCAGGCACGCCCGAGATGCAGGCTCCGGTCGCCAGCCGTCGAAAGCCA
CCCAGCGCCTTCCGCGAGTGGAGGCTGCTGGGGCCGTTCCGGAGACCCACGACCCAGCTGCGCGCCAAAG
TCTCCAGCCTGTCGCACAAGATCCGCGCCGGGGGCGCGCAGCGCGCAGAGGCAGCGTGCGCCCAGCGCTC
AGAGGTGGAGGCTGTGTCCCTAGGCGTCCCACACGAGGTGGCCGAGGGCGCCACCTGCCAGGCCTACGAA
TTGGCCGACTACAGCAACCTACGGGAGACCGATATTTAA

Translation (572 aa):
MTFRDLLSVSFEGPRPDSSAGGSSAGGGGGSAGGAAPSEGPAVGGVPGGAGGGGGVVGAGSGEDNRSSAG
EPGSAGAGGDVNGTAAVGGLVVSAQGVGVGVFLAAFILMAVAGNLLVILSVACNRHLQTVTNYFIVNLAV
ADLLLSATVLPFSATMEVLGFWAFGRAFCDVWAAVDVLCCTASILSLCTISVDRYVGVRHSLKYPAIMTE
RKAAAILALLWVVALVVSVGPLLGWKEPVPPDERFCGITEEAGYAVFSSVCSFYLPMAVIVVMYCRVYVV
ARSTTRSLEAGVKRERGKASEVVLRIHCRGAATGADGAHGMRSAKGHTFRSSLSVRLLKFSREKKAAKTL
AIVVGVFVLCWFPFFFVLPLGSLFPQLKPSEGVFKVIFWLGYFNSCVNPLIYPCSSREFKRAFLRLLRCQ
CRRRRRRRPLWRVYGHHWRASTSGLRQDCAPSSGDAPPGAPLALTALPDPDPEPPGTPEMQAPVASRRKP
PSAFREWRLLGPFRRPTTQLRAKVSSLSHKIRAGGAQRAEAACAQRSEVEAVSLGVPHEVAEGATCQAYE
LADYSNLRETDI


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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